Nocardiopsis dassonvillei: Ndas_0007
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Entry
Ndas_0007 CDS
T01248
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nda03032
]
Ndas_0007
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_0007
Enzymes [BR:
nda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ndas_0007
DNA replication proteins [BR:
nda03032
]
Prokaryotic type
DNA Topoisomerases
Ndas_0007
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ndas_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
Barstar
Motif
Other DBs
NCBI-ProteinID:
ADH65460
UniProt:
D7B607
LinkDB
All DBs
Position
1:9880..12492
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AA seq
870 aa
AA seq
DB search
MTDANNPDAPEGGDSTVEAPPRVTDRIEPVDIQVEMQRSYLDYAMSVIVGRALPDVRDGL
KPVHQRVLYAMYDGGYRPDRGYFKCARVVGDVMGNYHPHGDSAIYDTLVRLAQWWSMRMP
LVDPNGNFGSAGNDPAAAMRYTECKLAPLAMEMLRDIDKDTVDFRPNYDGRSSEPVVLPA
RFPNLLVNGSSGIAVGMATNIPPHNLREVADGVNWYLDNPEAQDEELLDALIARVKGPDF
PTRGLIVGKRGIEEAYRTGRGSITMRAVVEVEEDKRGRQTLVVTELPYQVNPDNLALKIA
DLVKDGKITGIADVRDESSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQETFGANMLAL
VDGVPRTLRLDQMIRHWVKHQVEVIVRRTRYLLRKAEERAHILRALLRAMDRIDEVINLI
RASASADQARTGLMDLLEIDDIQARAILDMQLRKLAALERNALTAEYDELMAQIADYNDI
LESDTRQRSIIREELGEIVEKYGDERRTHIIPFEGDMRMEDFIAEEDVVVTISRGGYAKR
TRIDNYRAQKRGGKGVRGAQLKQDDIVQHFFVTTTHNWILCFTNQGRVYRTKAYELPEAA
RDARGQHVANLLPFQPGEEIAQIMALRDYEAAPYLVLATREGLVKKSRLEDFDSARAAGI
IAINLREGDELIAARLVFPDDDLLLISSDAQAIRFPASDESLRPMGRATSGVIGMRFLED
DYLLSMDVIRPGDGSTDVLVTTENGYAKRTPSDQYPVQNRGGKGVLTAKVVEARGKLVGA
LMIDPEVDEVFAITSAGGVIRTGADEVKRSGRTTMGVRLMNLAKGNKIVAVARNAEAAEE
EAVETAEDAGEANADTAEDVNANAEGNPEA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatgcgaacaaccccgacgcccctgagggcggggactccactgtggaggccccg
ccgcgcgtgaccgaccggatcgagcccgtcgacatccaggtcgagatgcagcgcagctac
ctcgactacgcgatgtccgtcatcgtcggccgcgccctgcccgacgtgcgcgacggcctc
aagccggtccaccagcgcgtgctctacgcgatgtacgacggcggctaccgtcccgaccgc
ggctacttcaagtgcgcccgcgtcgtcggcgacgtcatgggcaactaccacccgcacggt
gacagcgccatctacgacaccctggtgcgcctggcgcagtggtggtccatgcggatgccg
ctggtcgaccccaacggcaacttcggctcggcgggcaacgacccggccgccgccatgcgc
tacaccgagtgcaagctcgcgccgctggccatggagatgctccgggacatcgacaaggac
accgtcgacttccggcccaactacgacggccgctcctccgagcccgtcgtgctgcccgcc
cgcttcccgaacctgctggtcaacggctcctcgggcatcgcggtcggtatggccaccaac
atcccgccgcacaacctgcgcgaggtcgccgacggcgtcaactggtacctcgacaacccc
gaggcgcaggacgaggagctgctcgacgcgctcatcgcacgcgtcaagggccccgacttc
cccacccgcgggctcatcgtcggcaagcgcggcatcgaggaggcgtaccggaccgggcgc
ggctccatcaccatgcgcgccgtggtcgaggtggaggaggacaagcggggccgccagacc
ctggtcgtcaccgagctgccctaccaggtcaacccggacaacctcgcgctcaagatcgcc
gacctggtcaaggacggcaagatcaccggcatcgccgacgtgcgcgacgagagcagcggc
cgcaccggacagcgcctggtcatcgtgctcaagcgcgacgccgtcgccaaggtcgtgctg
aacaacctctacaagcacacgcagctccaggagaccttcggcgcgaacatgctcgcgctg
gtcgacggggtgccgcgcaccctgcgcctggaccagatgatccggcactgggtcaagcac
caggtcgaggtcatcgtccgccggacccggtacctgctgcgcaaggccgaggagcgggcg
cacatcctgcgcgcgctgctgcgggccatggaccgcatcgacgaggtcatcaacctcatc
cgggccagcgcctccgcggaccaggcccgcaccggcctgatggacctgctggagatcgac
gacatccaggcccgcgccatcctcgacatgcagctgcgcaagctcgccgccctggagcgc
aacgccctgacggccgagtacgacgagctcatggcgcagatcgccgactacaacgacatc
ctcgaatcggacacgcgccagcggagcatcatccgcgaggagctcggcgagatcgtggag
aagtacggcgacgagcggcgcacgcacatcatccccttcgagggcgacatgcgcatggag
gacttcatcgccgaggaggacgtggtcgtcacgatctcccgcggtggatacgccaagcgc
acgcgcatcgacaactaccgcgcccagaagcgcggcggcaagggcgtgcgcggggcccag
ctcaagcaggacgacatcgtccagcacttcttcgtcaccaccacccacaactggatcctg
tgcttcaccaaccagggccgggtgtaccgcacgaaggcctacgagctgcccgaggccgcc
cgcgacgcgcgcggccagcacgtggcgaacctgctcccgttccagccgggcgaggagatc
gcgcagatcatggcgctgcgcgactacgaggccgccccgtacctggtgctcgccacccgt
gagggcctggtcaagaagtcccgtctggaggacttcgactcggcgcgcgcggcgggcatc
atcgcgatcaacctgcgcgagggcgacgagctgatcgccgcccggctggtcttccccgac
gacgacctgctgctgatctccagcgacgcccaggcgatccggttcccggcctccgacgag
tcgctgcgccccatgggccgcgccaccagcggcgtgatcggcatgcggttcctggaggac
gactacctgctgagcatggacgtcatccggcccggcgacggctccacggacgtcctggtc
accaccgagaacggctacgccaagcgcaccccgtccgaccagtacccggtgcagaaccgc
ggcggcaagggcgtgctgacggccaaggtggtggaggcccgcggcaagctggtgggcgcc
ctgatgatcgaccccgaggtggacgaggtcttcgcgatcacctccgctggcggtgtcatc
cgcaccggtgccgacgaggtcaagcggtccggccgcacgaccatgggcgtccggctgatg
aacctggccaagggcaacaagatcgtggccgtggcgcgcaacgccgaggccgccgaggag
gaggccgtcgagacggccgaggacgcgggtgaagcgaacgccgacacggccgaggacgtg
aacgcgaacgccgaaggcaacccggaggcctag
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