Nocardiopsis dassonvillei: Ndas_0057
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Entry
Ndas_0057 CDS
T01248
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ndas_0057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nda03000
]
Ndas_0057
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_0057
Enzymes [BR:
nda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Ndas_0057
Transcription factors [BR:
nda03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Ndas_0057
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ndas_0057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ADH65509
UniProt:
D7B6V5
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All DBs
Position
1:complement(74282..76021)
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AA seq
579 aa
AA seq
DB search
MSENRQLRCAASANMDGVMDDDQRYRAVHSRDARFDGVFYTAVRTTGIYCRPSCPAVTPK
RANVRFYPTAAAAQESGFRACKRCRPDLTPGSPEWNLRADVVGRAMRLIQDGAVDRGGVS
ALASAVGYSERQLNRLLSAEVGAGPLALARTERAQTARVLVETTDMPMADVAFAAGFASV
RQFNETMRAVFDRSPTEMRTMGGRRASASGGSRPGDARPPATEPGTVTLRLPYREPIDLA
RMLRFLGDRAVPGVEEYRDGVYRRTLMLAHGPAVVELSEGSGTGRAGRTGRAGATGGVRP
ADAVDGGVSVSGGGHVLCRLRLSEARDLTSAVRRCRRLLDLDADPGAVAEALGGDPLLGP
IVAAHPGLRSPGHVDPAELAVRAVLGQQVSVRAARTLAGRLVERFGEPLAPGLEAPGGGL
THVFPSPDALAAADPAGFSVPVARGRALAGLCEAIASGWIDLGPGCDRDEAERRLVELRG
IGPWTAGYVRMRGLGDPDVFLHGDLGVRMALEAGGRRATPAAAAREAREWSPWRSYANHA
LWASLADRERESTAVRADVVVRDGVRDASKERQERKESA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaaccgccagcttcggtgcgccgcgtcggcgaacatggatggcgtgatggac
gacgaccagcgctaccgcgccgtacacagcagggacgcccgcttcgacggcgtcttctac
acagccgtgcgcaccacgggtatctactgccgtccgagctgcccggccgtcaccccgaaa
cgggccaacgtccgcttctacccgaccgccgcggccgcccaggagtcggggttccgcgcc
tgcaagcggtgccgtcccgacctcacccccggttcgccggagtggaacctgcgggccgac
gtggtgggccgcgcgatgcgcctcatccaggacggcgccgtggaccggggcggcgtcagc
gccctggcctcggcggtcggctacagcgaacgccagctcaaccggctgctgtcggccgag
gtgggcgcggggccgctggccctggcccggaccgagcgcgcccagacggcacgggtgctg
gtggagaccaccgacatgccgatggcggacgtcgccttcgccgcggggttcgcgagcgta
cgccagttcaacgagacgatgcgcgcggtgttcgaccgctcccccaccgagatgcggacc
atgggcggtcggcgtgcgtcggcttccggggggtcgcgtccgggggacgcccgccctccg
gccaccgagccggggacggtcacgctgcggctgccctaccgggagcccatcgacctggcc
cggatgctgaggttcctcggagaccgtgcggttccgggcgtggaggagtaccgggacggg
gtctaccgcaggacgctgatgctggcgcacggtcccgccgtggtggagttgtccgagggg
tccgggaccggcagggcgggcaggaccggccgcgctggtgccacgggcggcgttcgtccg
gcggacgctgtggacggcggggtgtccgtgagcggtggggggcacgtgctgtgccgcctg
cggttgtcggaggcgcgcgacctgaccagcgcggtgcgcaggtgccgcaggctgctcgac
ctggacgccgacccgggtgcggtggccgaggccctgggcggggaccccctcctgggaccg
atcgtggccgcccacccgggactgcgatcgccggggcacgtggacccggccgaactggcg
gtccgggcggtcctcggccagcaggtgtcggtgcgtgcggcccgcacgctggcggggcgg
ctggtcgagcggttcggcgaaccgctcgctccgggcctggaagcgccgggcggaggactc
acccacgtgttcccctcccctgacgcgctcgccgcggccgacccggccggtttctccgtc
ccggtcgcgcggggacgcgccctggcggggctgtgcgaggcgatcgcctcggggtggatc
gacctggggccgggatgcgaccgggacgaggccgaacggcgtctggtggagctgcgcggc
atcggtccgtggaccgccggttacgtgcgcatgcggggtctgggcgacccggacgtgttc
ctgcacggcgacctgggcgtccggatggcgctggaggcggggggcagacgggcgaccccc
gcggcggccgcgcgcgaggcacgggagtggagcccgtggcggtcctacgccaaccacgcg
ctgtgggcgtcgttggccgaccgtgagcgggagagcacggccgttcgggcggacgtggtc
gtgcgggacggcgtgcgggatgcttcgaaggaacgtcaggaacggaaggaatcggcatga
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