Nocardiopsis dassonvillei: Ndas_0314
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Entry
Ndas_0314 CDS
T01248
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03030
DNA replication
nda03430
Mismatch repair
nda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ndas_0314
03430 Mismatch repair
Ndas_0314
03440 Homologous recombination
Ndas_0314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nda03032
]
Ndas_0314
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_0314
Enzymes [BR:
nda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ndas_0314
DNA replication proteins [BR:
nda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ndas_0314
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ndas_0314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Isochorismatase
Motif
Other DBs
NCBI-ProteinID:
ADH65762
UniProt:
D7AVA1
LinkDB
All DBs
Position
1:389487..390218
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AA seq
243 aa
AA seq
DB search
MGTSRPGKVPMTWHTRPMAAFDTESTGLDLANDRIVTAALWRIDPAARTKEVTTWLIDPG
IDIPQEATDIHHITTEHAREHGRPAAEAVPEIGAALEKAAADGVPVVVYNAPYDLGLLSA
ELRRHDAGARFDGTLRVLDPLVIDKRFDTFRRGSRKLVDVCAHHGVRLDAEQAHGAAADA
LAAARLAWKLAAAHPELAAMDIDDLHAAQAVWKAEQAASFQDYLRRRDPEAVVDGSWPLP
GPA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgggcacatcccgacccggaaaggtccccatgacctggcacacccggcccatggccgcg
ttcgacaccgagtccaccggcctggacctggccaacgaccggatcgtcaccgccgccctg
tggcgcatcgaccccgcggcccgcaccaaggaggtcaccacctggctcatcgaccccggg
atcgacatcccccaggaagccaccgacatccaccacatcaccaccgagcacgcccgcgag
cacggccgccccgccgccgaggcggtgcccgagatcggcgccgccctggagaaggccgcc
gcggacggagtgccggtggtggtctacaacgccccctacgacctgggcctgctctccgcc
gaactccggcgccacgacgccggggcgcgcttcgacgggacgctgcgcgtcctggacccg
ctggtgatcgacaagcgcttcgacaccttccggcgcggctcgcgcaaactggtcgacgtg
tgcgcccaccacggcgtgcgcctggacgccgaacaggcgcacggggccgccgcggacgcg
ctcgccgccgcccggctggcctggaagctcgccgccgcacaccccgaactggcggccatg
gacatcgacgacctgcacgccgcacaggcggtctggaaggccgaacaggccgcgagcttc
caggactacctgcggcgcagggaccccgaggcggtcgtggacggctcctggccgctgccc
ggtcccgcctga
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