Nocardiopsis dassonvillei: Ndas_0424
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Entry
Ndas_0424 CDS
T01248
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda00260
Glycine, serine and threonine metabolism
nda00460
Cyanoamino acid metabolism
nda00630
Glyoxylate and dicarboxylate metabolism
nda00670
One carbon pool by folate
nda00680
Methane metabolism
nda01100
Metabolic pathways
nda01110
Biosynthesis of secondary metabolites
nda01120
Microbial metabolism in diverse environments
nda01200
Carbon metabolism
nda01230
Biosynthesis of amino acids
nda01240
Biosynthesis of cofactors
nda04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ndas_0424
09102 Energy metabolism
00680 Methane metabolism
Ndas_0424
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ndas_0424
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ndas_0424
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ndas_0424
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Ndas_0424
Enzymes [BR:
nda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ndas_0424
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
B12-binding
SelA
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
ADH65871
UniProt:
D7AWA5
LinkDB
All DBs
Position
1:complement(513705..514973)
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AA seq
422 aa
AA seq
DB search
MATDNTLNQTLGELDPEVAAAVDAELARQRDTLEMIASENFAPQAVIEAQGTVLTNKYAE
GYPGRRYYGGCEHVDVVEQLAIDRAKALFGAEHANVQPHSGAQANTAVYFALLKPGDTIL
GLDLAHGGHLTHGMKINYSGKILNAVAYHVRDEDGTVDYDEVEALAEEHRPKMIVAGWSA
YPRQLDFARFRKIADSVGALLMVDMAHFAGLVAAGLHPNPVPHADVVTTTTHKTLGGPRG
GMILAKAELGKKINSAVFPGMQGGPLEHVIAAKAVALKVAAGEEFADRQRRTVSGARLLA
ERLTRPDAAEVGVKVLSGGTDVHLVLVDLVNSELNGQEAEDRLHSIGITVNRNAVPNDPR
PPMVTSGLRIGTPALATRGFGDEDFAEVADVIAEALKPEFDEAALRGRVQALTAKYPLYP
NL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctactgacaacacgctcaaccagacgctgggcgaactggaccccgaggtggcggcc
gcggtcgacgcggagctggcccgccagcgcgacaccctggagatgatcgcctcggagaac
ttcgccccccaggcggtgatcgaggcccagggcaccgtcctgaccaacaagtacgcggaa
gggtacccgggccgccgctactacggcgggtgcgagcacgtcgacgtcgtcgagcagctc
gccatcgaccgcgccaaggcgctgttcggcgccgagcacgccaacgtgcagccgcactcg
ggcgcgcaggccaacacggccgtgtacttcgcgctgctcaagccgggtgacaccatcctg
ggcctggacctggcccacggcggccacctgacccacggcatgaagatcaactactccggc
aagatcctcaacgcggtggcctaccacgtgcgcgacgaggacggcaccgtcgactacgac
gaggtcgaggcgctcgccgaggagcaccggcccaagatgatcgtcgccgggtggtcggcc
tacccgcgccagctggacttcgcccgcttccgcaagatcgcggactcggtcggcgcgctc
ctgatggtggacatggcgcacttcgccggtctggtcgcggcggggctgcaccccaacccg
gtgccgcacgccgacgtggtcaccacgaccacgcacaagaccctgggcggcccgcgcggc
ggcatgatcctggccaaggccgagctgggcaagaagatcaactccgcggtgttccccggc
atgcagggcgggccgctggagcacgtgatcgcggccaaggcggtggccctcaaggtcgcc
gcgggcgaggagttcgccgaccgccagcgccgcacggtctcgggcgccaggctgctcgcc
gagcggctgacgcggccggacgcggccgaggtcggcgtgaaggtgctctcggggggcacg
gacgtgcacctggtcctggtggacctggtgaactccgagctcaacggccaggaggccgag
gaccgcctgcactcgatcgggatcacggtcaaccgcaacgcggtgcccaacgacccgcgc
ccgccgatggtcacctccggtctgcggatcggcaccccggcgctggccacccgcggtttc
ggcgacgaggacttcgccgaggtcgcggacgtcatcgccgaggcgctcaagccggagttc
gacgaggccgcgctgcgcggccgggtccaggcgctgaccgcgaagtacccgctctacccg
aacctgtag
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