Nocardiopsis dassonvillei: Ndas_0976
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Entry
Ndas_0976 CDS
T01248
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nda03009
]
Ndas_0976
Enzymes [BR:
nda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Ndas_0976
Ribosome biogenesis [BR:
nda03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ndas_0976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADH66420
UniProt:
D7B0L3
LinkDB
All DBs
Position
1:1195042..1197126
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AA seq
694 aa
AA seq
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MSTPNNSSRGARDDAPRGERGDYDKRGGQGRGDSRDRRDDRPRGGYRDDRGPRGRDDRGG
FRGDRDDRGGRDFRGGRDGQRGEGRSFGGDRDGRRSFSGGRDDRGGRDFRGGRDDRDRGG
FRSDRGPGGGRDDRDRGGFRGDRDSRGGRDFRGGRDGQRDDRRSFGDRDNRGGRDSRGPG
GGRDFRDGGDRRSFSGGRDDRGGRDFRGGRDDRDRGGFRSDRGPGGGRDDRDRGGFRGDR
DNRRSFDNRGGRDGQRDDRRSFGDRDNRGSGGRFQDRDNRGGRDSRDGGDRRSFPGGRDE
RGGRDFRDRDNRGPGARSYDRGGRGPGGGRDDRDRGGFRGDRDSRGGRDFRGGRDGQRGE
GRSFGGGRDDRRSFGDRDNRGGRDSRGSGGGRDFRDREDRDGRPGGDRSGAKRVTSENQL
SKAARERLSALRADYDPKDEDHADEARDTYTDVENGIRLQKALAAAGVASRRASEEMIAA
GRVSVDGQVVRRFGARVDPESSEIRVDGMRVVTAPDKLYFALNKPRGVVSTMWDPEGRPT
LADYTGQTEERIFHVGRLDTETEGLILLTNDGELANRLTHPRYKVVKTYIAKVPGPVPHR
VVREVQKGVELEDGPVEVDSFRVVDNEPPKALVEIRLHEGRKHIVRRLMEAVGHPVADLA
RTQVGPIDLNALKLGTMRALTSREVSELYEAAGL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacacctaacaacagttcccgcggtgcgcgggacgacgccccgcgcggtgagcgc
ggcgactacgacaagcgcggcggacagggccgcggcgacagccgggaccgccgggacgac
cgtccccgcggcggttaccgggacgaccgcggcccccggggccgcgacgaccgcggcgga
ttccggggggaccgggacgaccgcggcggacgtgacttccgcggcggccgcgacggccag
cgcggcgagggccgctccttcggcggcgaccgcgacggccgccgttccttctcgggcggt
cgggacgaccgtggtggccgtgacttccggggcggtcgtgatgaccgtgaccgtggtggc
ttccgcagtgaccgtggcccgggtggcggccgggacgaccgtgaccgcggtggcttccgg
ggtgaccgggacagccgtggtgggcgcgacttccgtggtggccgtgacggtcagcgggac
gaccgccgttccttcggcgaccgcgacaaccgcggcgggcgtgacagccgtggtcccggt
ggcggacgcgacttccgcgacggtggggaccggcgttcgttctcgggcggtcgggacgac
cgtggtggccgtgacttccggggcggtcgtgatgaccgtgaccgtggtggcttccgcagt
gaccgtggcccgggtggcggccgggacgaccgcgaccgcggtggcttccggggcgaccgc
gacaaccgccgctccttcgacaaccgcggcggccgtgacggtcagcgggacgaccgccgt
tccttcggcgaccgcgacaaccgcggctcgggcggtcgcttccaggaccgtgacaaccgt
ggcgggcgtgacagccgcgacggtggggaccgtcgttccttcccgggtggccgggacgag
cgcggcggccgtgacttccgtgaccgcgacaaccgcggcccgggtgcacgctcctacgac
cgtggcggacgcggcccgggtggcggtcgtgatgaccgcgaccgcggtggcttccggggt
gaccgggacagccgtggcgggcgcgacttccgcggtggccgtgacggccagcgcggcgag
ggacgctccttcggaggcggccgcgacgaccgccgctccttcggtgaccgcgacaaccgc
ggcggccgtgacagccgcggctccggtggcggacgcgacttccgcgaccgcgaggaccgc
gacggccgtcccggcggcgaccgctccggcgccaagcgcgtcacgagcgagaaccagctc
tccaaggcggcccgcgagcggctcagcgccctgcgcgccgactacgaccccaaggacgag
gaccacgccgacgaggcgcgcgacacctacaccgacgtcgagaacggcatccgcctccag
aaggcgctcgccgcggccggggtcgccagccgccgggccagcgaggagatgatcgcggcc
ggacgcgtcagcgtggacggccaggtcgtgcgcaggttcggcgcccgggtcgaccccgag
tcctccgagatccgcgtcgacggcatgcgcgtggtcaccgccccggacaagctgtacttc
gcgctcaacaagccgcgcggcgtcgtcagcaccatgtgggaccccgagggccggcccacc
ctggccgactacaccggtcagaccgaggagcggatcttccacgtcggccggctcgacacc
gagaccgagggcctcatcctgctgaccaacgacggcgagctggccaaccggctcacccac
ccgcgctacaaggtcgtcaagacctacatcgccaaggtgcccggcccggtcccgcaccgt
gtcgtgcgcgaggtgcagaagggcgtggagctggaggacggcccggtcgaggtggactcc
ttccgcgtggtcgacaacgagccgcccaaggcgctcgtcgagatccggctgcacgagggc
cgcaagcacatcgtgcgccgcctgatggaggccgtcggccacccggtcgccgacctcgcc
cgcacccaggtcggcccgatcgacctgaacgccctcaaactgggcacgatgcgggccctc
acctcgcgtgaggtgagcgaactctacgaggccgcgggcctgtag
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