Nocardiopsis dassonvillei: Ndas_1198
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Entry
Ndas_1198 CDS
T01248
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_1198
Transcription machinery [BR:
nda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ndas_1198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_23
HTH_3
MarR_2
HTH_37
Sigma70_ECF
MarR
HTH_Crp_2
KORA
HTH_31
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ADH66639
UniProt:
D7B218
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All DBs
Position
1:1454716..1455657
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AA seq
313 aa
AA seq
DB search
MSTQDRAPGGFLLSTSLNETHTSTTVTDRLPVIPRPRRPVEDTVPEDTGTGEVRETGEVR
PEELISQLRELAEDDPRADELRERVVVLYQPLINKIARRYGGRGEPLEDLKQTAMVGLVK
AVRGYDPARGKPFISYLLPTVTGEIKRHFRDHTWAVRVPRRHQENRVKLRRVTGEFQQAH
ARTPTVHELSEEMGLPEAEVGELIQVSESYRSLSLDAPDSSDSEGQEGTRLEDHLGCEDA
ALDRVVERESLKPALARLPAREREILRLRFFGDHTQSEIADRLGYSQMHVSRLLSGVLEQ
LREEVGGHAPGHG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacaggacagagcaccggggggtttcctcttgtccacgtctctcaacgaaaca
cacacgtcaacgaccgtcaccgaccggttgcccgtgatccccagaccgcgcaggccggtc
gaggacaccgtccccgaggacacggggaccggagaggtccgggagaccggggaggtccgc
cccgaggagctgatctcccagctgcgtgagctcgctgaagacgaccccagggccgacgag
ctgcgcgagcgggtggtcgtgctctaccagccgttgatcaacaagatcgcgcgccgctac
ggggggcgcggcgagccgctggaggacctgaagcagaccgcgatggtggggttggtcaag
gccgtgcgcggttacgacccggcccgcggcaagcccttcatctcctacctgctgcccacg
gtgacgggggagatcaagcggcacttccgcgaccacacctgggcggtgcgggtgccgcgc
cgccaccaggagaaccgggtgaagctgcgccgggtgacgggggagttccagcaggcccac
gcgcgcacgcccacggtccacgaactctccgaggagatggggctgcccgaggccgaggtc
ggcgagctcatccaggtctcggagtcctaccggtcgctgtccctggacgcgcccgactcc
tccgattccgaggggcaggagggcacgcgcctggaggaccacctgggctgtgaggacgcg
gcgctggaccgggtggtggagcgcgagtcgctcaagcccgcgctggcgcgcctgcccgcc
cgcgagcgggagatcctgcggctgcggttcttcggggaccacacccagtccgagatcgcg
gaccggttggggtactcccagatgcacgtgtcccggctgctgtcgggggtgctggaacag
ctgcgcgaggaggtcggcgggcacgcgcccggccacggctga
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