Nocardiopsis dassonvillei: Ndas_1770
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Entry
Ndas_1770 CDS
T01248
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_1770
Transcription machinery [BR:
nda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ndas_1770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
Sigma70_ECF
MarR
KORA
HTH_24
HTH_23
GerE
DUF7343
HTH_Crp_2
MarR_2
HTH_16
NirdL-like_HTH
DUF134
HTH_3
MTR4_beta-barrel
HTH_37
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADH67198
UniProt:
D7B5D1
LinkDB
All DBs
Position
1:2168060..2168923
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AA seq
287 aa
AA seq
DB search
MSTTLNKDTVSQADTDHTTLVPRTRTSSPVKEIPAEELLAELHGLDDDDPRAVRLREEVV
VRYQPLVNKLARRYNGRGEPLEDLKQTAMVGLVKAIRGYRPDRGKPFISYLMPTVTGEIK
RHFRDHTWAIRVPRRHQENRIKLRQVLNTFQQTHARVPTNAEIAKEMGLDEEEVVELVQA
SESYRSLSLDAPDSSDSDGQEGSRLEDHLGSEDEGLERVVQRESLKPALARLPEREREIL
KLRFFGDHTQTEIADRMGYSQMHVSRLLKNTLEQLREDVGERGPARG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaccacgttgaacaaggacaccgtgtcgcaggccgacaccgaccacacgaccctc
gtccccaggacgcgcacgtcctcgccggttaaggagatcccggccgaggaactcctcgcc
gaactccacggtctggacgacgacgacccgcgcgcggtcaggctgcgcgaggaggtcgtg
gtccgctaccagccgctggtcaacaagctcgcccgccgctacaacggccgaggtgagccg
ttggaggacctcaagcagaccgccatggtcggcctggtcaaggccatccgcggctaccgg
cccgaccgcggcaagcccttcatctcctacctgatgcccacggtcaccggtgagatcaag
cggcacttccgcgaccacacctgggcgatccgggttcccaggcgtcaccaggagaaccgg
atcaagctgcgccaggtcctcaacaccttccagcagacccacgcgcgcgtccccaccaac
gccgagatcgccaaggagatggggctggacgaggaggaggtcgtcgagctggtccaggcc
tcggagtcctaccgctccctctcgctggacgcccccgactcctccgactccgacggccag
gagggctcccgcctggaggaccacctgggcagcgaggacgagggcctggagcgggtcgtg
cagcgcgagtcgctcaagcccgccctggcccgtctgcccgagcgcgagcgcgagatcctc
aagctgcgcttcttcggcgaccacacccagaccgagatcgccgaccgcatgggctactcc
cagatgcacgtctcccggctgctgaagaacaccctggagcagctgcgcgaggacgtgggc
gagcgcggtcccgcccggggctga
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