KEGG   Nocardiopsis dassonvillei: Ndas_1887
Entry
Ndas_1887         CDS       T01248                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
nda  Nocardiopsis dassonvillei
Pathway
nda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ndas_1887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nda03400]
    Ndas_1887
DNA repair and recombination proteins [BR:nda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ndas_1887
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Ndas_1887
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_16 DnaJ_CXXCXGXG nSTAND1 AAA_29 AAA_25 RsgA_GTPase AAA_22 Anti-TRAP
Other DBs
NCBI-ProteinID: ADH67315
UniProt: D7B650
LinkDB
Position
1:complement(2300319..2302649)
AA seq 776 aa
MDNHDDRIRVRGARIHNLKNVDTELPRDALVAFTGVSGSGKSSLAFGTLYAESQHRYLES
VAPYARRLLQQLPAPEVDDVTGMPPAVALAQPRSAPSVRSTVGTLTTLSNTLRMLFSRAG
DYPPGARRLDSDSFSPNTAAGACPTCHGEGVEHEVTEGSLVPDPGLSIADGAVASWPGAW
QGKNLRDILDTLGYDIHRPWRELPQGERDWILFTEEQPVVTVHPVREAGRVHRPYQGRYS
SARRLVLKAYASSASEARRRRAAEFMVDRTCPECGGRRLRQEALRVTFAGHTIAELAALP
LTELVALLRPWAQDPGAAGALVGEIAARVGVLSELGLGYLSAARPAPTLSTGEFQRIRLA
TQLGTGLFGVVYVLDEPSAGLHPADAEALSRTLRRLRDGGNTVCFVEHDLDVVRGADWIV
DVGPGAGEHGGRVLYSGPVPGLRGVPESVTRRYLFGDALPEHRPRTPGGYLELRGATRNN
LQGLDADVPLGVFTALTGVSGSGKSSLLAELGDRAAEHGRVVWVSQQPIGRTPRSNLATY
TGLFDTVRKLFAATEEARSLGYGPGRFSFNVVGGRCPECEGEGFVSVELLFLPTTYAPCP
ACGGSRYNDDTLRVRYRGRTVADVLAMSVEEAAGFFTEEPSVRRSLETLTGVGLGYLRLG
QPATELSGGEAQRIKLATELQRRRVADTVYLLDEPTTGLHPHDTDVLVGRLRDLVGAGAT
VVAAEHDMRVVATADHVIDLGPGGGSQGGRIVAQGTPAQVAAAPDSRTGPYLKGLL
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggacaaccacgacgaccgcatccgggtgcgcggcgcccgcatccacaacctcaagaac
gtggacacggagctgccccgcgacgccctggtcgccttcaccggcgtctccgggtcgggg
aagtcctccctggccttcggaaccctctacgccgagtcccagcaccggtacctggagtcg
gtggcgccgtacgccaggcgcctgctccagcagctcccggccccggaggtggacgacgtc
accgggatgccgcccgccgtggcgctcgcccagccgcgctcggcgccctcggtccgctcc
accgtgggcaccctcaccacgctgtccaacacactgcgcatgctcttctcccgggcgggc
gactacccgcccggggcgcggcgcctggactcggactccttctcccccaacaccgcggcc
ggggcctgcccgacgtgtcacggggagggggtcgagcacgaggtcaccgaggggtcgctg
gtgcccgaccccgggctgagcatcgccgacggggcggtcgcctcctggcccggggcatgg
cagggcaagaacctgcgcgacatcctcgacaccctcgggtacgacatccaccggccctgg
cgggagctgccccaaggcgagcgcgactggatcctgttcaccgaggagcagcccgtggtg
accgtccacccggtccgcgaggcggggcgtgtccaccggccctaccagggcaggtacagc
agcgcgcgcaggctggtgctcaaggcgtacgcctcctccgccagcgaggcccgtcggcgc
agggccgccgagttcatggtggaccggacctgcccggagtgcggcggtcggcggctgcgg
caggaggcgctgcgcgtcaccttcgccgggcacaccatcgccgaactcgcggcgctgccc
ctgaccgagctggtggccctgctgcgcccctgggcgcaggacccgggcgcggcgggggct
ctggtcggggagatcgcggcacgggtcggggtgctgtcggagctgggcctgggctatctg
agcgcggcccgaccggccccgaccctgtccaccggggagttccagcggatccggctggcc
acccagctgggcacggggctcttcggggtggtctacgtcctggacgagccctccgcgggc
ctgcacccggccgacgccgaggcgctctccaggaccctgcggcgcctgcgcgacgggggc
aacaccgtgtgcttcgtcgagcacgacctggacgtggtgcgcggcgcggactggatcgtc
gacgtcgggccgggggcgggcgagcacggcgggcgcgtcctgtacagcggcccggtcccc
ggcctgcgcggggtcccggagtcggtgacacgccgctacctgttcggcgacgccctcccg
gagcaccggccccgcacccccggcggatacctggaactgcgcggggccacccgcaacaac
ctccaagggctggacgccgacgtccccctcggcgtgttcaccgccctcaccggcgtgtcc
ggctcgggcaagtcctccctgctggcggagctcggggaccgggccgccgaacacggccgg
gtggtgtgggtcagccagcagcccatcggacggacgccgcgctccaacctggcgacctac
accgggctcttcgacacagtgcgcaagctgttcgcggccaccgaggaggcccgctcgctc
ggttacgggcccggccggttctccttcaacgtcgtggggggacgctgcccggagtgcgag
ggcgaggggttcgtgtcggtggagctgctgttcctgcccaccacctacgcgccctgtcca
gcctgtggcggctcgcgctacaacgacgacaccctccgggtgcggtaccgggggcgcacg
gtcgcggacgtgctcgcgatgtcggtggaggaggcggcggggttcttcaccgaggagccg
tcggtgcggcgttctctggagaccctcaccggggtgggcctgggctacctgcgcttgggc
cagcccgcgacggagctgtccggcggcgaggcccagcggatcaaactggccaccgaactc
cagcgccgccgggtcgccgacacggtctacctgctcgacgagcccaccaccggtctccat
ccgcacgacaccgacgtcctcgtcggccgcctgcgcgacctggtcggcgcgggcgccacc
gtggtggcggccgagcacgacatgcgggtcgtggccaccgccgaccacgtcatcgacctg
ggcccgggcggcggatcgcaggggggccggatcgtcgctcagggcacgcccgcacaggtc
gcggcggccccggacagccgcacgggcccctacctcaaggggctgctctga

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