Nocardiopsis dassonvillei: Ndas_1887
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Entry
Ndas_1887 CDS
T01248
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ndas_1887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_1887
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ndas_1887
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ndas_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_16
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_25
RsgA_GTPase
AAA_22
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ADH67315
UniProt:
D7B650
LinkDB
All DBs
Position
1:complement(2300319..2302649)
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AA seq
776 aa
AA seq
DB search
MDNHDDRIRVRGARIHNLKNVDTELPRDALVAFTGVSGSGKSSLAFGTLYAESQHRYLES
VAPYARRLLQQLPAPEVDDVTGMPPAVALAQPRSAPSVRSTVGTLTTLSNTLRMLFSRAG
DYPPGARRLDSDSFSPNTAAGACPTCHGEGVEHEVTEGSLVPDPGLSIADGAVASWPGAW
QGKNLRDILDTLGYDIHRPWRELPQGERDWILFTEEQPVVTVHPVREAGRVHRPYQGRYS
SARRLVLKAYASSASEARRRRAAEFMVDRTCPECGGRRLRQEALRVTFAGHTIAELAALP
LTELVALLRPWAQDPGAAGALVGEIAARVGVLSELGLGYLSAARPAPTLSTGEFQRIRLA
TQLGTGLFGVVYVLDEPSAGLHPADAEALSRTLRRLRDGGNTVCFVEHDLDVVRGADWIV
DVGPGAGEHGGRVLYSGPVPGLRGVPESVTRRYLFGDALPEHRPRTPGGYLELRGATRNN
LQGLDADVPLGVFTALTGVSGSGKSSLLAELGDRAAEHGRVVWVSQQPIGRTPRSNLATY
TGLFDTVRKLFAATEEARSLGYGPGRFSFNVVGGRCPECEGEGFVSVELLFLPTTYAPCP
ACGGSRYNDDTLRVRYRGRTVADVLAMSVEEAAGFFTEEPSVRRSLETLTGVGLGYLRLG
QPATELSGGEAQRIKLATELQRRRVADTVYLLDEPTTGLHPHDTDVLVGRLRDLVGAGAT
VVAAEHDMRVVATADHVIDLGPGGGSQGGRIVAQGTPAQVAAAPDSRTGPYLKGLL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccacgacgaccgcatccgggtgcgcggcgcccgcatccacaacctcaagaac
gtggacacggagctgccccgcgacgccctggtcgccttcaccggcgtctccgggtcgggg
aagtcctccctggccttcggaaccctctacgccgagtcccagcaccggtacctggagtcg
gtggcgccgtacgccaggcgcctgctccagcagctcccggccccggaggtggacgacgtc
accgggatgccgcccgccgtggcgctcgcccagccgcgctcggcgccctcggtccgctcc
accgtgggcaccctcaccacgctgtccaacacactgcgcatgctcttctcccgggcgggc
gactacccgcccggggcgcggcgcctggactcggactccttctcccccaacaccgcggcc
ggggcctgcccgacgtgtcacggggagggggtcgagcacgaggtcaccgaggggtcgctg
gtgcccgaccccgggctgagcatcgccgacggggcggtcgcctcctggcccggggcatgg
cagggcaagaacctgcgcgacatcctcgacaccctcgggtacgacatccaccggccctgg
cgggagctgccccaaggcgagcgcgactggatcctgttcaccgaggagcagcccgtggtg
accgtccacccggtccgcgaggcggggcgtgtccaccggccctaccagggcaggtacagc
agcgcgcgcaggctggtgctcaaggcgtacgcctcctccgccagcgaggcccgtcggcgc
agggccgccgagttcatggtggaccggacctgcccggagtgcggcggtcggcggctgcgg
caggaggcgctgcgcgtcaccttcgccgggcacaccatcgccgaactcgcggcgctgccc
ctgaccgagctggtggccctgctgcgcccctgggcgcaggacccgggcgcggcgggggct
ctggtcggggagatcgcggcacgggtcggggtgctgtcggagctgggcctgggctatctg
agcgcggcccgaccggccccgaccctgtccaccggggagttccagcggatccggctggcc
acccagctgggcacggggctcttcggggtggtctacgtcctggacgagccctccgcgggc
ctgcacccggccgacgccgaggcgctctccaggaccctgcggcgcctgcgcgacgggggc
aacaccgtgtgcttcgtcgagcacgacctggacgtggtgcgcggcgcggactggatcgtc
gacgtcgggccgggggcgggcgagcacggcgggcgcgtcctgtacagcggcccggtcccc
ggcctgcgcggggtcccggagtcggtgacacgccgctacctgttcggcgacgccctcccg
gagcaccggccccgcacccccggcggatacctggaactgcgcggggccacccgcaacaac
ctccaagggctggacgccgacgtccccctcggcgtgttcaccgccctcaccggcgtgtcc
ggctcgggcaagtcctccctgctggcggagctcggggaccgggccgccgaacacggccgg
gtggtgtgggtcagccagcagcccatcggacggacgccgcgctccaacctggcgacctac
accgggctcttcgacacagtgcgcaagctgttcgcggccaccgaggaggcccgctcgctc
ggttacgggcccggccggttctccttcaacgtcgtggggggacgctgcccggagtgcgag
ggcgaggggttcgtgtcggtggagctgctgttcctgcccaccacctacgcgccctgtcca
gcctgtggcggctcgcgctacaacgacgacaccctccgggtgcggtaccgggggcgcacg
gtcgcggacgtgctcgcgatgtcggtggaggaggcggcggggttcttcaccgaggagccg
tcggtgcggcgttctctggagaccctcaccggggtgggcctgggctacctgcgcttgggc
cagcccgcgacggagctgtccggcggcgaggcccagcggatcaaactggccaccgaactc
cagcgccgccgggtcgccgacacggtctacctgctcgacgagcccaccaccggtctccat
ccgcacgacaccgacgtcctcgtcggccgcctgcgcgacctggtcggcgcgggcgccacc
gtggtggcggccgagcacgacatgcgggtcgtggccaccgccgaccacgtcatcgacctg
ggcccgggcggcggatcgcaggggggccggatcgtcgctcagggcacgcccgcacaggtc
gcggcggccccggacagccgcacgggcccctacctcaaggggctgctctga
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