Nocardiopsis dassonvillei: Ndas_1913
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Entry
Ndas_1913 CDS
T01248
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ndas_1913
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nda02000
]
Ndas_1913
Transporters [BR:
nda02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Ndas_1913
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ADH67340
UniProt:
D7B675
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All DBs
Position
1:complement(2332906..2333952)
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AA seq
348 aa
AA seq
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MTLTRGRGVLSAAAITSVLAMTACGNADLPPAAATGDGGTVITYNSPAEWGNYGEVLAAF
TERTGIQAPNDPKNSGQALAALQAEKGAPVADVAYTGIAFAGQLVEAGVLQSYVPEGAEE
VPEDLRDPDGNWTAVHTGTIAFIVNEDHLDGAPVPSSWEDLLDPAYEGKVGYLDPTQAAV
GYSAATAVNHALGGDLTDWGPGLDYLAELKENGASTSAQTATAKVAQGEIPILIDTDFNG
YKLRDEGADVSVVIPEEGSLQIPYIVGLVEGAPNADNGRELLDFYFSEQGQGLFADGYMR
PVVGQMPEELADRVLPESDYERAITIDYLEQGERQQEFIDLYQSEVGF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcacccgcggacgcggcgtcctgagcgccgccgcgatcacctccgtcctcgcc
atgaccgcctgcggcaacgccgacctgcccccggccgcggccaccggcgacggcggcacc
gtcatcacctacaactcccccgccgagtggggcaactacggcgaggtcctggccgccttc
accgagcggaccgggatccaggcccccaacgacccgaagaactccgggcaggccctggcc
gcgctccaggccgagaagggcgcgcccgtcgccgacgtcgcctacaccggcatcgccttc
gccggacagctcgtggaggccggggtcctgcagtcctacgtgcccgagggcgcggaggag
gtccccgaggacctgcgcgatcccgacgggaactggacggccgtccacaccggcaccatc
gccttcatcgtcaacgaggaccacctggacggcgcgcccgtgccgagcagctgggaggac
ctcctcgaccccgcctacgagggcaaggtcggctacctcgaccccacccaggcggccgtg
ggctactccgccgcgacggcggtcaaccacgcgctcggcggcgacctgaccgactggggg
ccgggtctggactacctggccgagctgaaggagaacggcgcctccacctccgcccagacc
gccaccgccaaggtcgcccagggcgagatccccatcctcatcgacaccgacttcaacggc
tacaagctccgcgacgagggcgccgacgtcagcgtcgtcatccccgaggagggatcgctg
cagatcccctacatcgtcggcctggtcgagggcgcccccaacgccgacaacggcagggag
ctgctggacttctacttctccgagcagggccagggcctcttcgcggacggttacatgcgc
ccggtggtcggccagatgcccgaggagctcgccgaccgggtcctgcccgagtccgactac
gagcgcgcgatcaccatcgactacctcgaacagggcgagcggcagcaggagttcatcgac
ctgtaccagagcgaggtcggcttctag
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