Nocardiopsis dassonvillei: Ndas_1926
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Entry
Ndas_1926 CDS
T01248
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ndas_1926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nda02000
]
Ndas_1926
Transporters [BR:
nda02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Ndas_1926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADH67353
UniProt:
D7B688
LinkDB
All DBs
Position
1:2346178..2347239
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AA seq
353 aa
AA seq
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MSRTAHPRRMLAALAGTAALALVSASCAPVREDDPDTLVVSTFAFATEEFTEVVADPFEA
ETGIRVVLDTGNNAGRLTKLRINAETPDTDVVLISDYYAQIGKDMGLFAPVDPADVPNLD
AIQPWAVDPDGYGPAYTFQLLGLLYRTDLVEEAPDSWDDLWAEPEGGYVLPDISVSAGPM
FVLAAGEHFGSGPSDPDAGFEAMGRIGADALQFYTGSTELTSLLERGEIAMAPGLDNFAM
GSVEAGQPIGFAAPEQGRVMTANTVQVVDGAPNEAGALAFVDFLLRPEIQEGMAEALYDK
PVALEADPTPLMERVSGQAASSPSDSGYHQGDLALIAQERSTWLDRFTEEVAR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaccgcacacccgcgccgcatgctcgccgcgctcgccgggacggcggcgctg
gccctggtgagcgcctcgtgcgcaccggtgcgcgaggacgaccccgacacgctggtggtg
agcaccttcgccttcgccaccgaggagttcaccgaggtggtggccgaccccttcgaggcc
gagaccgggatccgggtggtcctggacaccggcaacaacgccgggcggctcaccaagctc
aggatcaacgccgagacgcccgacaccgacgtcgtgctcatctccgactactacgcccag
atcggcaaggacatggggctgttcgcccccgtcgaccccgccgacgtgcccaacctcgac
gccatccagccctgggcggtggacccggacgggtacggccccgcctacaccttccagctc
ctgggcctgctctaccgcaccgacctcgtcgaggaggcccccgactcctgggacgacctg
tgggccgagcccgagggagggtacgtgctgcccgacatctcggtctcggccggtccgatg
ttcgtcctggccgcgggcgaacacttcggctcgggtccctccgaccccgacgccggcttc
gaggcgatgggccggatcggcgcggacgcgctccagttctacaccggctccaccgagctc
accagcctgctcgaacgcggtgagatcgccatggcgcccggcctggacaacttcgccatg
ggctcggtggaggccgggcagccgatcggcttcgccgcgcccgaacagggccgggtgatg
accgccaacaccgtccaggtggtcgacggggcgcccaacgaggccggtgcactggccttc
gtcgacttcctgctgcgccccgagatccaggaggggatggccgaggccctctacgacaag
cccgtggcgctggaggccgaccccaccccgctcatggagcgggtgtcgggacaggccgcc
tcctccccgtccgacagcggctaccaccagggcgacctggccctcatcgcgcaggagcgc
tccacctggctggaccgcttcaccgaggaggtggcgcggtga
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