Nocardiopsis dassonvillei: Ndas_2129
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Entry
Ndas_2129 CDS
T01248
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03030
DNA replication
nda03430
Mismatch repair
nda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ndas_2129
03430 Mismatch repair
Ndas_2129
03440 Homologous recombination
Ndas_2129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nda03032
]
Ndas_2129
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_2129
Enzymes [BR:
nda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ndas_2129
DNA replication proteins [BR:
nda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ndas_2129
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ndas_2129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
ADH67553
UniProt:
D7AUH3
LinkDB
All DBs
Position
1:complement(2548558..2549565)
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AA seq
335 aa
AA seq
DB search
MSRTWTAIDFETANHDRGSACAVGLVRVRDGAVVDRYTTLIRPPRQVDFFSRHNIAVHGI
TAADVADAPSWEQAHARIVEFADGGPLVAHNAAFDMGVLRQACGHTGLSHPAWEYACTLA
LSRRTWSGLPDHKLPTVCAHIGHRVTHHHRADADAEAAARIVIAAMERYGTPSLADLTRA
ARTDLRRVEALPGSAVPAPVPAAAAPVQPALLAASAAAAAPEDRFGRWQRDARTPLPEPS
PDADPTGPLYGRTVCVSGDLESMDKPEVWRRVAEAGGRPAKNVTRKTDMLVLGGHGGPGK
TAKHLRAEIYRERGQRIDLVTEAELLALLGMTTRP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccggacctggaccgcgatcgacttcgagaccgccaaccacgaccgcggcagcgcg
tgcgcggtcggcctggtgcgggtgcgcgacggcgcggtcgtggaccggtacaccacgctg
atccggccgccgaggcaggtggacttcttctcccgccacaacatcgccgtgcacggcatc
accgcggccgacgtcgccgacgccccctcctgggaacaggcgcacgcgcgcatcgtggag
ttcgccgacggcggccccctggtggcgcacaacgccgccttcgacatgggggtgctgcgc
caggcctgcggacacaccgggctgtcccacccggcgtgggagtacgcgtgcacgctggcg
ctgtcccggcgcacctggagcgggctgcccgaccacaagctgccgaccgtgtgcgcccac
atcgggcaccgggtgacgcaccaccaccgagccgacgccgacgccgaggccgccgcgcgc
atcgtgatcgccgccatggagcgctacggcaccccgtcgctggccgacctgacccgtgcc
gcgcggacggacctgcgccgggtggaggccttgcccgggagcgcggtgcccgccccggtc
ccggccgccgccgcgcccgtccagcccgcgctgctcgccgcgtccgccgcggctgccgcg
cccgaggaccggttcggacggtggcagcgcgacgcccggacgccgctgcccgagccctcc
ccggacgccgaccccaccgggccgctgtacgggcgcaccgtgtgcgtctccggcgacctg
gagtccatggacaagcccgaggtgtggcggcgcgtggccgaggcgggcgggcggcccgcc
aagaacgtcaccaggaagaccgacatgctcgtcctcgggggccacggcggccccggaaag
accgccaagcacctgcgggccgagatctaccgcgagcgaggccagcgcatcgacctggtc
accgaggccgaactgctggccctgctggggatgaccacccgcccctga
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