Nocardiopsis dassonvillei: Ndas_2402
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Entry
Ndas_2402 CDS
T01248
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_2402
Transcription machinery [BR:
nda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ndas_2402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_23
MarR_2
DUF7343
HTH_37
HTH_Crp_2
MarR
Motif
Other DBs
NCBI-ProteinID:
ADH67823
UniProt:
D7AWM6
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All DBs
Position
1:complement(2851576..2852433)
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AA seq
285 aa
AA seq
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MSINVPHATHETFDHTPAVPGPRRPVWDEDPTAEDMLAELHGLDRDDPRADDLCERVVVL
YQPLVNKLARRYNGRGEPLDDLQQTAMLGLVKAIHGFNPDRGKPFISYLLPTVTGEIKRH
FRDHTWAVRVSRRHQENRIKLRQALNDFQQAHARTPTVHELSEEMGLPEAEVGELIQVSE
SYRSLSLDAPDTSDSDGQEGTRLEDHLGSEDEGLELVVQRESLKPALARLPEREREILML
RFFGDHTQSEIADCLGYSQMHVSRLLNGVLGQLREEMGQDGRARG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgtccatcaacgttccccacgcgacgcacgagaccttcgaccacacaccagccgtcccc
ggaccgcgcagaccggtctgggacgaggaccccaccgccgaggacatgctcgccgaactc
cacggcctggacagggacgatccgcgggccgacgacctgtgcgaacgggtcgtggtcctc
taccagccgctggtcaacaagctcgcccgccgctacaacggccgcggcgaaccgctggac
gacctgcaacagaccgccatgctcgggctggtcaaggccatccacggcttcaaccccgac
cgcggcaagccgttcatctcctacctgctgcccacggtcaccggtgagatcaagcggcac
ttccgcgaccacacctgggccgtgcgcgtgtcccggcgccaccaggagaaccggatcaag
ctgcgccaggcgctcaacgacttccagcaggcccacgcgcgcacgcccacggtccacgaa
ctctccgaggagatggggctgcccgaggccgaggtcggcgagctcatccaggtctcggag
tcctaccgctccctgtcactggacgccccggacacctccgactccgacggccaggagggc
acccggctggaggaccacctgggcagcgaggacgagggcctggaactggtggtccagcgc
gagtcgctcaagcccgccctggcccgcctgcccgagcgcgagcgcgagatcctcatgctg
cgcttcttcggcgaccacacccagtccgagatcgccgactgtctcggctactcgcagatg
cacgtctcccggctcctcaacggagtcctggggcagctgcgcgaggagatgggacaggac
gggcgcgctcggggatga
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