Nocardiopsis dassonvillei: Ndas_2569
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Entry
Ndas_2569 CDS
T01248
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ndas_2569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_2569
Transcription machinery [BR:
nda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ndas_2569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
PDE6_gamma
KORA
Pox_Ag35
Motif
Other DBs
NCBI-ProteinID:
ADH67988
UniProt:
D7AXT4
LinkDB
All DBs
Position
1:3064116..3065522
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AA seq
468 aa
AA seq
DB search
MTSTAPAAPAPTAGAPADTARSDDASADAVLTDLLDRGRAQGHLSLSELRAAFTAAAVST
GDGRSILRELTENGVRLANGGDDSAPVADPDAEDDVLEDTLIATVPDTDEAPRAEGKTAP
RKGPSPRRKTRSTRRVKKAEPAQTTTDAETGEADLDDQSPAMGDSVHTYLKAIGRRQLLT
AEQEVDLAKRVEAGLYAEYRLGLHGEVDGSAPLAEAEVEELEWVAEDGRKAKSHMLEANL
RLVVSVAKKYSDRGMSLLDVVQEGNLGLIRAVEKFDYTKGFKFSTYAMWWIRQAIQRGFA
DSARTIRLPVHVLELLSKVSRLERDMHQALGREPTPEELGLELDKTPAQIEELLRVTRQP
ISLDSTIGEDGETRIGDLIEDVDASEASEVVDRQLMADQLRNALSDLEPREATIMSLRFG
LMDGRPRTLDEIGKHLGLTRERIRQLEKQSLSKLRHPSRAQQLLDFAS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcactgccccagccgctccggcacccaccgccggagcccccgctgacaccgct
cgcagcgacgacgcgtccgccgacgcggtcctgaccgacctgctcgaccgcggacgcgcc
caggggcacctgtccctctccgaactgcgtgccgctttcaccgcggccgccgtctccacc
ggcgacggccgttccatcctgcgtgaactcaccgagaacggggtcaggctcgccaacggg
ggcgacgactccgcaccggtggccgatcccgacgccgaggacgacgtgctggaagacact
ctcatcgccacggtgcccgacaccgacgaggcacccagggccgaaggcaagaccgcgccg
cgcaagggcccctccccccggaggaagacccgctccacacggcgcgtcaagaaggccgag
cccgcccagaccaccaccgacgcggagaccggcgaggccgacctcgacgaccagtccccc
gccatgggcgactcggtccacacctacctcaaggccatcggccgacgccagctcctcacc
gcggagcaggaggtcgacctggccaagcgggtcgaggccgggctctacgccgagtaccgg
ctcggcctgcacggcgaggtggacggctccgccccgctggccgaggccgaggtcgaggag
ctggagtgggtggccgaggacggccgcaaggccaagtcccacatgctggaggccaacctg
cgcctggtggtgtcggtggccaagaagtacagcgaccgggggatgtcgctgctcgacgtg
gtccaggagggcaacctcggcctgatccgcgccgtggagaagttcgactacaccaagggc
ttcaagttctccacctacgccatgtggtggatccgccaggccatccagcgcggtttcgcc
gactccgcgcgcaccatccgcctgcccgtgcacgtcctggagctgctgagcaaggtcagc
cgcctggagcgcgacatgcaccaggcgctgggccgcgagcccacgccggaggagctgggc
ctggagctggacaagaccccggcccagatcgaggagctgctgcgggtcacccgccagccc
atcagcctggactccacgatcggcgaggacggcgagacccgcatcggcgacctgatcgag
gacgtggacgcctcggaggcctccgaggtggtggaccgccagctcatggccgaccagctg
cgcaacgcgctgtcggacctggagccgcgcgaggccaccatcatgtccctgcgcttcggc
ctcatggacggccgtccgcgcaccctggacgagatcggcaagcacctggggctgacccgc
gagcgcatccgccagctggagaagcagtcgctgtccaagctgcgccaccccagccgcgcc
cagcagctgctggacttcgccagctag
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