Nocardiopsis dassonvillei: Ndas_3307
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Entry
Ndas_3307 CDS
T01248
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nda03032
]
Ndas_3307
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_3307
Enzymes [BR:
nda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ndas_3307
DNA replication proteins [BR:
nda03032
]
Prokaryotic type
DNA Topoisomerases
Ndas_3307
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ndas_3307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
DUF4106
Motif
Other DBs
NCBI-ProteinID:
ADH68713
UniProt:
D7B323
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All DBs
Position
1:complement(3948983..3951088)
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AA seq
701 aa
AA seq
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MTALTAVVHDPEDYSARHLSVLEGLEAVRKRPGMYIGSTDSRGLTHCMWEIIDNSVDEAL
GGFCTRIDVTLHSDGSVSVSDDGRGIPVDAEPKSGLSGVELVMTKLHAGGKFGSGSYTAS
GGLHGVGASVVNALSSRVDVEVDRQGRTHAISFRRGIPGRFAGSGPDAEFTPVSGLEQVR
KVAQKITGTRIRFWPDMQIFLKDADIAREALLDRARQTAFLVPGLTLSVRDERVEGEPAH
EEEFRFDGGIGEFCTFLAPDEPVSDVLRIQGSGNFTETVPVLDDAGHMVPADVERRLDVD
VALRWGTGYDTTVRSFVNVIATPKGGTHINGFERALVRVINEQLRTTKLLRNSDDPVTKD
DTQEGLTAVVTVRLPEPQFEGQTKEILGTSAATRIVSQVVGKELREFLTSTKKVEKARAR
SVLEKVVGAAKARLAARQQRETQRRKTALENSALPAKLVDCRSEGLEHSELFIVEGDSAL
GTAKLARDSEFQALLPIRGKILNVQKSSVADMLKNAECAAILQVVGAGSGRTFDIDAARY
GRIILMADADVDGAHIRCLLLTLIYRYMRPMLEAGRVYAAVPPLHRIELTNTRRKRGSKP
EDRYVYTYSDAELSRTLLDLEKRKISWKEPVQRYKGLGEMDADQLAETTMDPRYRTLRRI
RVEQAEEASSVFNLLMGNEVAPRRRFIQQGAQELDVARIDT
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccttgaccgcagtcgtccacgaccccgaggattactccgcccgacacctgtcg
gtcctcgaaggtcttgaggcggtgcgcaaacggccgggcatgtacatcgggtccaccgac
agccgcggcctcacccactgcatgtgggagatcatcgacaactccgtggacgaggccctg
ggcggcttctgcacccggatcgacgtcacactgcactccgacgggtcggtgtcggtgagc
gacgacggacgcggaatccccgtggacgccgagcccaagtccggcctgtccggtgtggaa
ctggtcatgaccaagctccacgcgggcggcaagttcggctccggctcctacaccgcctcc
ggcggcctgcacggcgtcggcgcctcggtggtcaacgccctgtcgtcccgcgtggacgtc
gaggtcgaccgccagggccgcacccacgcgatcagcttccgccggggcatccccggccgc
ttcgccggttccggccccgacgccgagttcacgccggtctcgggcctggagcaggtccgc
aaggtggcccagaagatcaccggcacccgcatccggttctggccggacatgcagatcttc
ctcaaggacgccgacatcgcccgcgaggcgctgctggaccgggcccgccagaccgcgttc
ctggtgccgggcctgaccctctccgtgcgcgacgagcgcgtggagggggagcccgcccac
gaggaggagttccgcttcgacggcggcatcggcgagttctgcaccttcctggcccccgac
gagccggtcagcgacgtgctgcgcatccagggcagcggcaacttcaccgagaccgtcccg
gtcctggacgacgcggggcacatggtgcccgccgacgtcgagcgccgcctggacgtggac
gtcgccctgcgctgggggacgggctacgacaccaccgtgcgctccttcgtcaacgtcatc
gccacccccaagggcggcacccacatcaacggcttcgaacgggccctggtgcgggtgatc
aacgagcagctgcgcaccaccaagctgctgaggaacagcgacgaccccgtcaccaaggac
gacacccaggaggggctcaccgcggtcgtcaccgtccgcctgcccgagccccagttcgag
ggccagaccaaggagatcctcggcacctccgcggcgaccaggatcgtctcccaggtggtc
ggcaaggagctgcgcgagttcctgacctccaccaagaaggtggagaaggccagggcgcgc
agcgtcctggagaaggtggtcggggccgccaaggcccgcctggccgcgcgccagcagcgc
gagacccagcggcgcaagaccgccctggagaactcggcgctgcccgccaagctggtggac
tgccgcagcgagggcctggagcacagcgagctgttcatcgtcgagggggactcggcgctg
ggcaccgccaagctggcccgcgactcggagttccaggcgctgctgccgatccggggcaag
atcctcaacgtgcagaagtcctcggtcgccgacatgctcaagaacgccgagtgcgcggcc
atcctccaggtggtcggcgccggttcggggcgcaccttcgacatcgacgcggcccgctac
ggccggatcatcctcatggccgacgccgacgtggacggcgcgcacatccgctgcctgctg
ctcacgctcatctaccgctacatgcggccgatgctggaggccggacgggtgtacgcggcc
gtgccgccgctgcaccgcatcgagctgaccaacacccggcgcaagcgcggcagcaagccc
gaggaccgctacgtctacacctactccgacgccgagctctcgcgcacgctgctggacctg
gagaagcgcaagatctcctggaaggagccggtgcagcgctacaagggcctgggtgagatg
gacgccgaccagctggccgagaccaccatggacccgcgttaccgcaccctgcgccggatc
cgtgtggagcaggccgaggaggcctcgtccgtgttcaacctgctgatgggcaacgaggtc
gccccgcgccgccgcttcatccagcagggcgcccaggagctggacgtggcccgcatcgac
acctga
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