KEGG   Nocardiopsis dassonvillei: Ndas_3345
Entry
Ndas_3345         CDS       T01248                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
nda  Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:nda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nda03400]
    Ndas_3345
Enzymes [BR:nda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Ndas_3345
DNA repair and recombination proteins [BR:nda03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Ndas_3345
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Asparaginase_C SecA_DEAD
Other DBs
NCBI-ProteinID: ADH68751
UniProt: D7B361
LinkDB
Position
1:complement(3998597..4000681)
AA seq 694 aa
MADLPDVPTLLDAAVAALGGSRREGQATMAGAVAEAVDKREHLVVQAGTGTGKSLAYLVP
AIRHAMAKESTVVVSTATIALQNQLIERDLPRLAKALTPMLPREPTFAVLKGRRNYLCRN
RLQTAGEEAEDTELFDPRQLSSLGRQVARLHEWAEDTVTGDRDELVPGVSDLAWRQVSVA
ANECMGARICPFGQECFAEFAREATQGVDVVVTNHAMLSIDMSQGYHILPEHNTIMIDEA
HELVDRATSVATGVLGERTVNAAAKRAARLVEPGISERLTECADGLALMFTESPDGRLDH
IDDALANAVAATRDAASACVTAIGPSPGELDPDGASDRRLALAALGEVHDTAVRVLESFE
PALRDRTEVVWLTKTPGRQPALHVAPLGVGGLLREKLFGDRTVVLTSATLTLGGSFASLA
NQWGLGREVAQEAAERAAAGRGPEPAEPRDEDGSDDEDGPHRAAGEPRWRALDVGSPFEH
ARRGILYVATHLPPPGRDGLAPAYLDEISELIEAADGRALGLFSSMRAAQQAAEELRERL
DQPILCQGEDSTGQLVRRFAEEERSCLFGTLSLWQGVDVPGPSLSLVIVDRIPFPRPDDP
LASARQRAVAAHGGNGFLSVAATHAALLLAQGTGRLLRSTEDRGVIAVLDPRLATARYGG
FLRASLPPYWGTTDPAVARSALRRLAGQPEPAAG
NT seq 2085 nt   +upstreamnt  +downstreamnt
gtggcagatctccccgacgttcccaccctgctcgacgcggctgtcgccgccctgggcggc
agccgccgcgagggccaggcgaccatggccggtgccgtggccgaggcggtcgacaagcgc
gaacacctggtggtccaggccggtaccggcaccggaaagtccctggcctacctggtgccc
gcgatcagacacgccatggccaaggagagcacggtggtggtctccaccgccaccatcgcc
ctgcagaaccagctcatcgagcgcgacctgccgcgcctggccaaggccctcacgccgatg
ctgccccgcgagcccacgttcgccgtgctcaagggccgccgcaactacctgtgccgcaac
cggctccagaccgctggcgaggaggccgaggacaccgagctgttcgacccgcgccagctc
tcctcgctgggccggcaggtggcacgcctgcacgagtgggccgaggacaccgtcaccggc
gaccgcgacgaactcgtgcccggcgtcagcgacctggcctggcgccaggtgtcggtggcc
gccaacgagtgcatgggcgcccgcatctgccccttcggccaggagtgcttcgccgagttc
gcccgcgaggccacccagggcgtggacgtggtggtcaccaaccacgccatgctctccatc
gacatgtcgcagggctaccacatcctgcccgagcacaacacgatcatgatcgacgaggcg
cacgaactcgtcgaccgcgccacctccgtggctaccggcgtcctgggcgagcgcaccgtc
aacgccgcggccaagcgcgccgcccgcctggtcgaacccgggatcagcgaacgcctgacc
gagtgcgccgacggcctcgccctgatgttcaccgagtcgcccgacggacgcctggaccac
atcgacgacgccctggccaacgcggtcgccgccacccgcgacgccgcctcggcctgcgtc
accgccatcggcccctcacccggggagctggacccggacggcgccagcgaccgccgcctg
gccctggccgcgctcggcgaggtgcacgacaccgccgtgcgcgtcctggagtccttcgaa
cccgccctgcgcgaccgcaccgaggtcgtctggctgaccaagacccccggacgccaaccc
gcgctccacgtcgccccgctcggcgtgggcggactgctgcgcgagaagctcttcggcgac
cgcaccgtggtgctgacctccgccaccctcaccctgggcggctccttcgcctcgctggcc
aaccagtggggcctgggccgcgaggtggcccaggaggccgccgagcgcgccgccgcgggc
cgcggcccggaaccggccgaaccccgggacgaggacggttccgacgacgaggacggcccg
caccgcgcggccggggagccccgctggcgcgcgctggacgtcggctcgcccttcgagcac
gcccgcaggggcatcctctacgtggccacccacctgccgccgcccggccgcgacggcctc
gcgcccgcctacctggacgagatcagcgaactcatcgaggccgccgacggccgcgcgctg
ggcctgttctcctccatgcgcgccgcccagcaggccgcagaggaactccgcgagcgcctg
gaccagccgatcctgtgccagggggaggactccaccgggcagctggtgcgccgcttcgcc
gaggaggagcggtcctgcctgttcggcaccctgtcgctgtggcagggcgtggacgtgccc
ggaccctcgctgtccctggtgatcgtggaccgcatccccttcccccggcccgacgacccg
ctggcctccgcgcgccagcgcgcagtcgccgcgcacgggggcaacggcttcctgtcggtg
gccgccacccacgccgccctgctgctcgcccagggcaccgggcgcctgctgcgctccacc
gaggaccggggggtcatcgccgtcctggacccgcgcctggccacggcccgctacggcggc
ttcctgcgcgcctccctgccgccctactgggggaccaccgatccggcggtggccaggtcc
gcgctgcgccgcctcgcgggccagcccgaacccgccgccgggtag

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