Nocardiopsis dassonvillei: Ndas_3692
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Entry
Ndas_3692 CDS
T01248
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_3692
Transcription machinery [BR:
nda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ndas_3692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
PF0610-like_N
DUF7343
HTH_Crp_2
Sigma70_ECF
HTH_5
MarR
NirdL-like_HTH
HTH_3
GerE
HTH_24
HTH_AraC
HTH_28
DksA-like_N
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ADH69090
UniProt:
D7B569
LinkDB
All DBs
Position
1:4430287..4431090
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AA seq
267 aa
AA seq
DB search
MSERGPALTAKTEHAVPDRARARELFERLGELEADSEERRRIRDELVELHLPLVEYLARR
FRNRGEWLDDLTQVATIGLIKSIDRFDLERGVEFSTYATPTIVGEIKRHFRDKGWAVRVP
RRLQELKLSLTKAVSDLSQREGRSPTVAELAAHLQMTEEEVLEGLESANAYSTVSLDAPD
SGDEDAPAVADSLGIVDESLEGVEYRESLKPLLEQLPPREKRILLLRFFGNMTQSQIAQE
LGISQMHVSRLLARTLAQLRQALTTDD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagagggggcccgctctgacagcgaagaccgagcacgcggtgcccgacagggcc
cgcgcgagagagttgttcgagcgcctcggcgaactcgaggcggactccgaggagcgccgg
aggatccgcgacgagctggtggagctccacctgcccttggtggagtacctggcccgccgc
ttccgcaaccgcggcgagtggctggacgacctcacccaggtggccacgatcgggctgatc
aagtccatcgaccggttcgacctggagcgcggggtggagttctccacctacgccaccccc
accatcgtcggtgagatcaagcggcacttccgcgacaagggctgggcggtgcgggttcca
cgccgcctccaggagctgaagctctcgctcaccaaggcggtcagcgacctgtcgcagcgg
gaggggcgctccccgaccgtcgccgagctcgcggcgcacctgcagatgaccgaggaggag
gtgctggagggcctggagtccgccaacgcctactcgacggtgtcgctggacgcgcccgac
agcggggacgaggacgcgcccgcggtggccgactcactgggcatcgtggacgagtccctg
gagggcgtggagtaccgggagtcgctcaagccgctcctggagcagcttccgccgcgggag
aagcgcatcctgctgctgcgcttcttcggcaacatgacgcagtcgcagatcgcccaggag
ctggggatctcgcagatgcacgtgtcccgtctgctggcccgcaccctggcgcagctgcgc
caggcgctgaccaccgacgactga
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