Nocardiopsis dassonvillei: Ndas_3807
Help
Entry
Ndas_3807 CDS
T01248
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03420
Nucleotide excision repair
nda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ndas_3807
03430 Mismatch repair
Ndas_3807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_3807
Enzymes [BR:
nda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ndas_3807
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ndas_3807
MMR (mismatch excision repair)
Other MMR factors
Ndas_3807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADH69204
UniProt:
D7B5W1
LinkDB
All DBs
Position
1:complement(4569029..4571155)
Genome browser
AA seq
708 aa
AA seq
DB search
MDPDRVLEGLDPEQTQAARALRGPVCILAGAGTGKTRAITHRIAYAVSSGVVAEQQVLAV
TFTARAAGEMRGRLRALGAPRVQARTFHAAALRQLSFFWPQVVGGEKPTLIESKLPVVSR
AAHSVGLQPDRNGLRDLAGEIEWSKVTQVRPTDYDKAVVKAGRQPPLPAGEVARVFEAYE
DLRREHNLLDFESMLELTAGMITEYPAIAQRVREQYRYFVVDEFQDVNPLQRLLLDAWLG
DRDDLCVVGDPSQTIYSFAGATPGYLTGFGARYPHATVVQLVRDYRSTPQVVRVANHVIA
QARGTTSAQHLTLQAQRPDGPDPMYQEYDDEPAEATGVARKISVLLEGGTPASEIAVLVR
TNGQSASYEQALTDEGVPFTMRGTTRFFERPEIKQAVHTLRGARHGAAGEEAEPLVRTVR
QLLGQLGLTESAPEGRQARERWESLTALAQLAEDMAAAPRPDGSPVTMADLVDELDVRMA
TEHAPGFEGVTIASLHAAKGLEWDAVFLVGLTEGMMPIIYAETDEQVEEERRLFYVGVTR
AREHLAMSWSLARSPGGRKTRKPSRFLDGLRPASPSTASRRAERRKGGVTRCRVCSATLT
DAAERKLGRCLDCPSSYDEALLERLRDWRRACAQEQKVPAYVIFTDATLQAVAEQEPGSL
TQLAAVSGVGAVKLDRYGEAVLALVAGADPADVMDRRTEDDGEEAADE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgaccgcgtcctggagggactggacccggagcagacccaggccgcacgcgcg
ctgcgcggccccgtgtgcatcctggccggtgccgggacgggcaagacccgggccatcacc
caccgcatcgcgtacgcggtctccagcggtgtggtcgccgagcagcaggtcctcgcggtc
accttcaccgcgcgcgccgccggggagatgcgcggccggctgcgcgccctgggcgccccc
cgcgtgcaggcccgcaccttccacgccgccgccctgcgccagctctccttcttctggccc
caggtcgtgggcggcgagaagcccaccctcatcgagagcaagctcccggtggtctcccgc
gccgcccactcggtgggcctccagcccgaccgcaacggcctgcgcgacctggccggcgag
atcgagtggtccaaggtcacccaggtgcgccccaccgactacgacaaggccgtggtcaag
gcgggccgccagcccccgctgcccgcgggcgaggtggcccgggtcttcgaggcctacgag
gacctgcgccgcgagcacaacctcctcgacttcgagtccatgctcgaactcaccgccggc
atgatcaccgagtacccggccatcgcccagcgcgtgcgcgagcagtaccggtacttcgtc
gtcgacgagttccaggacgtcaacccgctccagcgcctgctcctggacgcctggctgggc
gaccgcgacgacctgtgcgtggtcggcgaccccagccagaccatctactccttcgccggg
gccacccccggctacctgaccgggttcggcgcccgctacccccacgccaccgtggtccag
ctggtccgcgactaccgctccaccccccaggtcgtgcgggtggccaaccacgtcatcgcc
caggcgcgcggcacgacctccgcccagcacctgaccctccaggcccagcgccccgacggc
cccgacccgatgtaccaggagtacgacgacgagcccgccgaggccaccggggtcgcccgc
aagatcagcgtcctgctggagggcggcaccccggccagcgagatcgcggtgctggtgcgc
accaacggccagtcggcctcctacgagcaggcgctgaccgacgagggcgtgccgttcacg
atgcgcgggaccacccggttcttcgagcgccccgagatcaagcaggccgtgcacaccctg
cgcggcgcccggcacggggcggcgggggaggaggccgagcccctggtgcgcaccgtccgc
cagctgctcggacagctcggcctgaccgagagcgcgcccgaggggcgccaggcccgcgaa
cgctgggagtcgctgaccgcgctggcccagctggccgaggacatggccgccgcgccgagg
cccgacggcagtccggtgaccatggccgacctcgtggacgagctcgacgtgcgcatggcc
accgagcacgcgcccggcttcgagggcgtcaccatcgcctccctgcacgcggccaagggc
ctggagtgggacgccgtcttcctggtcggtctcaccgagggcatgatgccgatcatctac
gccgagaccgacgagcaggtggaggaggagcgccgcctgttctacgtgggcgtcacgcgg
gcccgcgagcacctggcgatgtcgtggtccctggcccgctcgcccggcggcaggaagacc
cgcaagccctcccgcttcctcgacggcctgcgccccgcctccccgtccaccgcctcccgg
cgcgccgagcgccgcaagggcggcgtgacccgctgccgggtgtgctcggccaccctcacc
gacgcggccgagcgcaagctgggccgctgcctggactgcccctccagctacgacgaggcc
ctgctggagcggctgcgcgactggcgccgcgcgtgcgcgcaggagcagaaggtgcccgcc
tacgtgatcttcaccgacgccaccctccaggccgtcgccgagcaggagcccggcagcctc
acccagctggcggcggtgtccggtgtcggcgcggtcaagctcgatcgctacggtgaggcg
gtactggcgctggtggcgggcgcggacccggcggacgtcatggaccgccggaccgaggac
gacggggaggaagcggcggatgagtga
DBGET
integrated database retrieval system
