Nocardiopsis dassonvillei: Ndas_3822
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Entry
Ndas_3822 CDS
T01248
Name
(GenBank) UvrD/REP helicase
Organism
nda
Nocardiopsis dassonvillei
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
DEAD
AAA_22
DUF2800
Motif
Other DBs
NCBI-ProteinID:
ADH69219
UniProt:
D7B5X6
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Position
1:complement(4585882..4589064)
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AA seq
1060 aa
AA seq
DB search
MRRAHQVQPPPVLDENQRRVVEHEGGPLLVLAGPGTGKTTTIVESVVDRIDHRGTDPSRV
LVLTFSRKAAQELRERITARLRRTTREPLALTFHSYAYALIRREFQRMGDLPPRLLSGPE
QLMEVRELLRGEALDGAADWPERLRPALETRGFAEELRDFLMRAQERGMGPDELAALGRD
RDRDDWVAAAGFLDRYTGRFDIAPVPTLNYAELVRVAANLLSDPGVRERERAAHEAVFVD
EYQDTDPAQEELLRALAGDGRDLVAVGDPDQSIYAFRGAEVRGILDFPRRFPTARRTEAP
VVALRTCRRSGRALLSASRGLTRRLPAVASARGHVNEHRDLTPAEGVPDGEVRVLLADSA
AQEAAVIADTLRRAHLVDGVPWSDMAVLVRSSTRQLPVLRRALTAASVPVAVGADDLPVA
AEPIVRPMLALIRYGLAPAELDEDAARELLTSPFGEADTVRLRRLVRALRRLDLDRAHDG
GAHGGAPEGDASREGAREERSGAYRPSAQLLVDALRDPAELTLVDPEIAAPATRVAQALR
TVRDLNARGADAEQVLWELWRDSGLADRLLRASLAGGRRGAAADRDLDAVVALFESAARY
CDRLPPGSPAGFLEDLAAQEIPGDSLAERAPEGEAVRILTAHRSKGLEWGLVVVAGAQEG
DWPDLRLRGSLLGVEELVDTDVHSADSSGAALASKLLDEERRLFYVALTRARRTLVVTAV
GGEDTDERPSRFLNEMGVGEPEPVSTGLRWLSLPSLVADLRSVVTDPGAPEPLREAAATH
LARLAEEGVRGADPAEWYALTPFTDDRPLAEEEDTIRVSPSQVESFTNCQLRWLLERAAG
ASSGDSASALGTVVHAVAVLVAQGSTPDEISGRMDEIWADLDFGGPWQARAQRDRADTMV
RKLVDWEAANDRELVVTEEGFRVDVGGIEITGRVDRLERDDQGRAVVVDIKTGKNKADDL
ARHPQLGVYQMAVLKGAFAKLGLTEPGGAALVQVGEKIQRAREQPQPPLSEDPDPGWAGT
LVREVATGMGGSRFTATRNKGCRSCAVRACCPVQDEGRHV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgcgcccaccaggtgcagccgccgccggtgctggacgagaaccagcggcgcgtg
gtcgagcacgagggcgggcccctgctggtgctcgccggtcccgggacaggcaagaccacc
acgatcgtcgagtcggtcgtggaccgcatcgaccaccggggcacggacccctcgcgcgtg
ctggtgctcaccttcagccgcaaggccgcccaggagctgcgcgagcgcatcaccgcccgg
ctgcgccgcaccacccgcgaaccgctggccctgaccttccacagctacgcctacgccctg
atccggcgcgagttccagcgcatgggcgacctgccgccgcgcctgctctcgggccccgag
cagctcatggaggtccgcgaactcctgcggggcgaggccctggacggcgccgcggactgg
cccgagcgcctgcgccccgccctggagacccgcgggttcgccgaggagctgcgcgacttc
ctcatgcgcgcccaggaacgcggcatgggcccggacgagctggccgcgctcggccgcgac
cgcgaccgcgacgactgggtggccgcggccgggttcctggaccgctacaccggccggttc
gacatcgcccccgtgcccacgctcaactacgccgaactcgtgcgcgtcgccgccaacctg
ctctccgaccccggggtccgcgagcgcgagcgcgccgcccacgaggcggtgttcgtcgac
gagtaccaggacaccgaccccgcccaggaggaactcctgcgcgccctggccggggacggc
cgcgacctggtcgcggtcggcgaccccgaccagtccatctacgccttccgcggggccgag
gtgcggggcatcctcgacttcccgcgccgcttcccgaccgcgcggcgcaccgaggcgccc
gtggtcgcgctgcgcacctgccgccgcagcggccgcgccctgctgtcggcctcgcgcggc
ctgacccggcgcctgcccgcggtcgcctccgcccgcggccacgtcaacgagcaccgcgac
ctgacccccgccgagggcgtgcccgacggcgaggtccgcgtgctgctggccgacagcgcc
gcccaggaggccgcggtcatcgccgacaccctgcgccgcgcccacctggtggacggcgtc
ccgtggtcggacatggccgtgctggtgcgctcctccacccgccagctgccggtgctgcgc
cgcgccctgaccgccgcctcggtcccggtcgcggtcggcgccgacgacctgcccgtggcc
gccgagcccatcgtgcgccccatgctcgcgctgatccgctacgggctggccccggccgag
ctggacgaggacgccgcgcgcgaactgctcaccagccccttcggcgaggccgacacggta
cggctgcgcaggctcgtgcgcgcgctgcgccgcctggacctggaccgcgcccacgacggc
ggcgcccacggcggagccccggaaggggacgcctcgcgggaaggcgcccgggaggagagg
agcggcgcctaccggccctccgcgcagctgctcgtggacgccctgcgcgacccggccgag
ctcaccctcgtcgaccccgagatcgccgcgcccgccacccgtgtcgcccaggcgctgcgg
accgtccgcgacctgaacgccaggggggccgacgccgaacaggtcctgtgggagctgtgg
cgcgacagcggcctggccgaccgcctgctgcgcgccagcctggccgggggccgccggggc
gccgccgccgaccgcgacctggacgccgtggtcgccctgttcgagagcgccgcccgctac
tgcgaccggctgccccccggcagtcccgcggggttcctggaggacctcgccgcccaggag
atccccggcgacagcctcgccgagcgcgcgcccgagggcgaggcggtgcgcatcctcacc
gcccaccgctccaagggcctggagtggggcctggtcgtggtcgccggagcccaggagggc
gactggcccgacctgcgcctgcgcggttccctgctcggcgtggaggaactcgtcgacacc
gacgtgcactccgccgactcctccggagctgccctggcctccaaactcctggacgaggag
cgccgcctgttctacgtggccctcacccgcgcccgccgcaccctggtggtgaccgccgtg
ggcggggaggacaccgacgagcggccctcgcgcttcctgaacgagatgggcgtgggcgag
cccgagccggtcagcaccggcctgcgctggctgtccctgccctcgctcgtcgccgacctg
cgctcggtggtcaccgaccccggcgcccccgaaccgctgcgcgaggccgccgccacccac
ctggcccgcctggccgaggagggcgtgcgcggcgccgaccccgcggagtggtacgcgctc
acccccttcaccgacgaccggcccctggccgaggaggaggacaccatccgcgtctcgccc
tcccaggtggagagcttcaccaactgccagctgcgctggctcctcgaacgcgccgccggg
gcctcctccggcgactcggcctcggccctgggcaccgtcgtgcacgcggtcgccgtcctg
gtcgcccagggcagcacccccgacgagatcagcgggcgcatggacgagatctgggccgac
ctggacttcggcggcccctggcaggccagggcgcagcgcgaccgcgccgacacgatggtc
cgcaagctcgtggactgggaggccgccaacgaccgcgaactcgtcgtcaccgaggagggc
ttccgggtggacgtgggcggcatcgagatcaccggccgcgtggaccgcctcgaacgcgac
gaccagggcagggccgtggtcgtggacatcaagaccgggaagaacaaggccgacgacctg
gcccgccacccccagctcggcgtctaccagatggccgtgctcaagggcgccttcgccaag
ctcggcctcaccgagccgggcggcgccgcgctcgtgcaggtcggcgagaagatccagagg
gcccgggaacaaccccagccgcccctgagcgaggaccccgaccccggatgggccgggacg
ctggtgcgcgaggtcgccaccggcatgggcggatcccgattcaccgcgacacgcaacaag
ggatgcaggtcgtgcgccgtgcgcgcctgctgcccggttcaggacgagggcagacatgtc
tga
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