Nocardiopsis dassonvillei: Ndas_4955
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Entry
Ndas_4955 CDS
T01248
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03030
DNA replication
nda03430
Mismatch repair
nda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ndas_4955
03430 Mismatch repair
Ndas_4955
03440 Homologous recombination
Ndas_4955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nda03032
]
Ndas_4955
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_4955
Enzymes [BR:
nda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ndas_4955
DNA replication proteins [BR:
nda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ndas_4955
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ndas_4955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
DNApol3-delta_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADH70337
UniProt:
D7B829
LinkDB
All DBs
Position
2:98132..99304
Genome browser
AA seq
390 aa
AA seq
DB search
MTVFDDLIGQRSTVGQLQRAVAGAADLVSGGRGTGMTHAWLFTGPPGSGRSEAARAFAAA
LQCRDGGCGHCASCHQTLAGTHPDVLYVRPSGLSFGVAATRDLVLRAGSKPSGGRFRIVL
FEDADRATEAASNALLKAVEEPSPRTVWLLCTPTPDDLLVTIRSRCRMVTLATPGTRELV
DALVQRDGIDAETARAAAVAASGRIDRARQLATDPEARRRREEVLSIPARLDGLGACVTS
AARLYEIAEEESKALTTALDEKEREELRAAFGEGSTGKGVAKAMRGSAGAMKDLEERQKR
RATRIKRDSYDRALLDLVAFYRDALTLQLGARVELSTAERSGDLERVARSSTPESTLRRI
DAIMECRERIAANVHPQIAMEAMTSALLAG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcttcgacgacctcatcggccagcggtccacggtgggccagctccagcgggcc
gtcgccggggccgccgacctcgtctccggcggacggggcacggggatgacccacgcctgg
ctgttcaccgggccgcccggttcgggccgctcggaggccgcccgggccttcgcggccgcc
ctccagtgccgggacggcggctgcgggcactgcgcctcctgtcaccagaccctcgccggc
acccaccccgacgtgctgtacgtgcggcccagcggactgagcttcggtgtggccgccacc
cgcgacctcgtgttgcgcgcaggctccaaaccctccggcggccggttccggatcgtgctg
ttcgaggacgccgaccgcgccaccgaggccgcctccaacgccctgctcaaggcggtggag
gagccctcgccgcgcaccgtgtggctgctgtgcacccccacccccgacgacctgctcgtc
accatccgttcgcgctgccgcatggtcaccctggccacgcccggcacccgggagctggtg
gacgccctcgtccagcgcgacgggatcgacgccgagaccgcccgcgccgcggcggtcgcc
gcctccgggcggatcgaccgggcccggcagctggccaccgaccccgaggcgcgcagacgc
cgggaggaggtgctgtccatccccgcccggctcgacgggctcggcgcgtgcgtcacctcc
gccgcccggctctacgagatcgccgaggaggagtccaaggccctcaccacggcgctcgac
gagaaggagagggaggagctgcgggccgcgttcggcgagggctccacgggcaagggcgtg
gccaaggcgatgcgcggctccgcgggggcgatgaaggacctggaggagcggcagaagcgc
cgtgccacccgcatcaagcgcgactcctacgaccgcgccctgctcgacctggtcgcgttc
taccgggacgcgctcaccctccagctgggcgcgagggtggagctgtccacggccgagcgc
tccggcgacctggaacgcgtcgcccgctccagcacaccggagtccacgctgcgcaggatc
gacgccatcatggagtgccgtgagcgcatcgccgcgaacgtgcacccccagatcgccatg
gaggccatgacctccgccctcctggccggatag
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