Nocardiopsis dassonvillei: Ndas_5152
Help
Entry
Ndas_5152 CDS
T01248
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ndas_5152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_5152
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_5152
Enzymes [BR:
nda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ndas_5152
Transcription machinery [BR:
nda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ndas_5152
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ndas_5152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AbiEi_4
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ADH70532
UniProt:
D7B8M4
LinkDB
All DBs
Position
2:292655..293677
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPTLTEEASSDLRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGAAVTSIRIEGVE
HEFTTVPGVKEDVTEMILNLKGLVVSSEHDEPVLMYLRKQGPGVVTAADIAPPAGVEVHN
PDLHIATLNGKGKLEMELTVERGRGYVSATQNKQAGQEIGRIPIDSIYSPVLRVTYKVEA
TRVEQRTDFDRLIVDIETKPAIRPRDAVASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEDLNLTVRSYNCLKREGIHSVGELVARSEQDLLDIRNFGAKSIDEVKQK
LVDMGLSLKDSPPGFDPSSAADSYSSEDDEGESFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgcacagcgtcccacgctcaccgaggaagcctcctcggacctgcgctcgaag
ttcgtcatcgagccgctggagccgggcttcggctacaccatcggcaactcgcttcggcgc
accctgctgtcctccatccccggcgcggctgtcacgagcatccgcatcgagggcgtcgag
cacgagttcaccaccgtgcccggtgtcaaggaggacgtcaccgagatgatcctcaacctc
aagggcctggtcgtcagctccgagcacgacgagccggtgctgatgtacctgcgcaagcag
ggccccggtgtggtgaccgccgcggacatcgctccgccggccggtgtcgaggtgcacaac
cccgacctgcacatcgccacgctcaacggcaagggcaagctggagatggagctgacggtc
gagcgcggccgcggctacgtctcggcgacgcagaacaagcaggcgggacaggagatcggc
cgcatcccgatcgactccatctactccccggtcctgcgtgtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgaccgcctgatcgtggacatcgagaccaagccg
gccatccgtccccgggacgcggtcgccagcgcgggcaagaccctggtcgagctgttcggt
ctggcgcgtgagctcaacgtcgacgccgagggcatcgacatgggcccgtcgcccacggac
gccgccctggcggcggacctggcgctgccgatcgaggacctcaacctcacggtccggtcc
tacaactgcctcaagcgtgagggcatccacagcgtcggtgagctggttgcccgctccgag
caggacctgttggacatccgcaacttcggtgccaagtccatcgacgaggtcaagcagaag
ctcgtcgacatgggcctgtcgctgaaggactccccgcccggattcgaccccagctcggcg
gccgactcctacagctccgaggacgacgagggcgagtccttcgtcgagacggagcagtac
taa
DBGET
integrated database retrieval system
