Nitrospira defluvii: NIDE0029
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Entry
NIDE0029 CDS
T01281
Symbol
fhlA
Name
(GenBank) Formate hydrogenlyase transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nde03000
]
NIDE0029 (fhlA)
Transcription factors [BR:
nde03000
]
Prokaryotic type
Helix-turn-helix
Other families
NIDE0029 (fhlA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF_2
GAF
Sigma54_activ_2
GAF_3
AAA_5
Mg_chelatase
HTH_8
AAA
AAA_16
AAA_2
MCM
AAA_19
bpMoxR
CCB2_CCB4
AAA_3
Motif
Other DBs
NCBI-ProteinID:
CBK39817
UniProt:
D8P9A8
LinkDB
All DBs
Position
24670..26751
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AA seq
693 aa
AA seq
DB search
MSHEPSAETVSSSLDRYRALLRVAEAIANHSDLSALVQDFARLLPSVVPVNFVGLSLHDP
RRGVMRLHALRANVPADIIGGHEGDPADTPAGLVWETQQTLLLSDLSTERRWPDMIRLMR
EDGVQSCCLVPLTSAARRLGSLEFSSLEQHAYGIADVELMQQIGRQVAVAVENVLNREAA
EASRRDVERQRDRFSLLLRMTNTIASTLDLREVFKAVSLCLREMVPQEYASLILCDGKNG
RVRLHALDFPENHGALTEGAMSDVAGSLAGLALERRRPAIANTLSDLKAFAHAVPQLLVM
KGFQSMCSLPLLSRDRVIGCLNLASHQEQAFSEQDVEFLSQVAGQIALAVDNALAYQEIH
TLKDRLTEEKLYLEEEIRVEHGFDDIIGESRALKQVLGQVEIVAPTDATVLILGETGTGK
ELIARAIHRLSGRHARTFVKLNCAAIPTGLLESELFGHERGAFTGAIAQKVGRFELAHGG
TIFLDEVGEIPLELQSKLLRVLQEQEFERLGSTRTIRVDIRLVAATNRDLAKLAEEGRFR
NDLYYRLNVFPLTLPPLRERREDIPMLVRYFAQHYAARMKKSIESIPAPTLETLSRYHWP
GNIRELENLVERAVILTQGTQLHVPLQELRLVEPERAAASPTLQDAERQQILRVLRETKW
TIGGPHGAAARLGLKRTTLTSKLKKLGLSRPRE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgaaccatcagcagagacggtgtcttctagcctcgaccggtatcgtgcgttg
ttgcgcgtggcggaggcgattgccaaccactccgacttgtctgcactggtgcaggatttc
gcgcgcttgttgccgtcggtcgtgcccgtcaacttcgtcggactctcactgcacgatcct
cggcgcggcgtcatgcgcctccatgcgctgcgtgcgaatgtccccgctgacatcatcggc
ggccatgaaggcgatccggctgacacgccggccggcctggtgtgggaaactcagcagacg
ctgttgctgagcgatctgtccacggaacggcgctggcctgacatgatcaggttgatgcgg
gaagatggtgtgcaatcctgttgcctagtgccgctgacctctgcggcccgacgattaggg
tccttggagttttcgagcctggaacagcacgcatacggcatcgccgatgtggaattgatg
caacagatcgggcgccaagtggcggtggcggtagagaatgtcctcaatcgtgaggctgcg
gaggcctcccggcgcgacgtcgaacggcagcgcgatcgcttcagtttgttgctgcggatg
acaaatacgattgcgtcgacgctggatcttcgcgaggtgttcaaggccgtgagcctctgt
cttcgcgagatggtgccgcaggaatacgccagcctgattctgtgcgacggcaagaatggc
cgcgtccgcctccatgccttggactttcctgaaaaccacggcgcgttgacggagggggcg
atgtctgatgttgccggttctctggccggcctggcgctggagcggaggcgccccgcgata
gcgaacactctgtcggacctgaaagcgtttgctcacgccgtgccgcagctcctggttatg
aagggcttccagtccatgtgttccttgcccctgttgtcgcgcgatcgcgtgatcggctgc
ctgaatctggcaagtcatcaagagcaggcgttcagcgagcaggatgtggaattcttgagc
caggtggccgggcagatcgcactggccgtcgacaatgccttggcgtatcaggagatccac
acgctcaaagatcgattgaccgaggaaaagttgtacttggaggaagaaatccgtgtggaa
catggcttcgacgatatcatcggcgagagccgtgcgttgaagcaggtgttggggcaggtg
gagatcgtggcgccgaccgatgcgacggtgctgatcctgggtgaaaccggaacgggaaag
gaactcattgccagggcgatccatcgcctaagcggtcgccacgcacgcacgttcgtcaaa
ctcaactgcgccgcgatccccaccggcctgctggagagtgaattgttcggtcatgaacgg
ggcgccttcaccggggccatcgcgcagaaggtcggccggttcgagttggcccatggcggg
acgatctttttggacgaggtgggggagattccgctggagttacaatctaagctgcttcgt
gtgttgcaggaacaagaattcgaacggctcgggagcacccgcacgatccgcgtggacatc
cggctggtggccgccacgaaccgggacctggcgaagctggccgaggagggccggtttcga
aacgatctgtactaccggttgaacgtgtttccccttacgttgccgccgcttcgcgagcgt
cgcgaagacatccccatgctcgtgcggtatttcgcgcagcactatgccgcgcgcatgaag
aagagcatcgaatcgatccctgccccgaccctcgaaaccctttcccgctatcactggccc
ggcaacattcgagaactggagaatctggtcgagcgggccgtcattctgacccaggggacg
caactgcatgtgccgctgcaggaactgaggctggtggaaccggagcgcgcggctgcgtcc
ccaaccttgcaggatgcggaacgccagcagattcttcgtgtcctgcgagagacgaagtgg
acgatcggcggaccgcatggcgcggcggctcgcttaggtttgaagcgcaccaccctcacg
tccaaactcaaaaagctcggcctctcgcgcccgagagaataa
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