Nitrospira defluvii: NIDE0051
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Entry
NIDE0051 CDS
T01281
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nde
Nitrospira defluvii
Pathway
nde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIDE0051 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nde03400
]
NIDE0051 (alkA)
Enzymes [BR:
nde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NIDE0051 (alkA)
DNA repair and recombination proteins [BR:
nde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIDE0051 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CBK39839
UniProt:
D8P9D0
LinkDB
All DBs
Position
44749..45426
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AA seq
225 aa
AA seq
DB search
MNQPSPEIVHLCKIDPVMKRVIGEVGPYALSLRARRSPFESLARAIAYQQLHDKAAESIL
KRFIALFPGRRFPRPADLLAMAPETIRGTGFSRAKIAALQDLAAKAMDGTVPTTAVIQRL
ADDAIVERLIAVRGVGRWTVEMLLIFQLGRPDVLPVDDFGVRNGFRIAYKRKAMPTPKEL
LVYGERWRPYRTAAAWYLWRAADQAKVVRTPLSVVTVTGKRAPNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccgtcaccggaaattgttcacctctgtaagatcgatccagtgatgaagcgg
gtgatcggcgaagtcggcccttatgcgttgtcactccgggcgaggcgctccccgtttgag
tcgctggcccgtgccattgcctatcagcaactgcatgacaaggcggcggagagcattctt
aagcggttcatcgcgctgtttcccggccggcggtttccccgtccggccgacttgctggcg
atggcgccggagactattcgcggcacagggttttctcgcgccaagattgccgcattgcag
gatctggcggccaaggcgatggatggaaccgtgccgaccacggccgtgattcaacggctc
gcggatgatgccattgtcgaacggctgatcgcggtgcgcggcgtcggacgatggaccgtg
gagatgttgctgatctttcagcttggccgacccgatgtcctgccggtggatgactttggc
gtgcggaatggattccgcatcgcatacaaacgaaaggcgatgccgactcctaaagagctg
ctagtgtatggggagcgctggaggccttatcgcacggcagcagcctggtatctctggcgc
gcggcggatcaggcgaaagtggtgcgaacacctctgtccgtggtgacggttacgggcaag
cgagctccgaatggctga
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