Nitrospira defluvii: NIDE0361
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Entry
NIDE0361 CDS
T01281
Symbol
trmE
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE0361 (trmE)
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NIDE0361 (trmE)
Prokaryotic type
Methyltransferases
NIDE0361 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
MMR_HSR1_Xtn
ABC_tran
AAA_29
Roc
Motif
Other DBs
NCBI-ProteinID:
CBK40140
UniProt:
D8PA81
LinkDB
All DBs
Position
325160..326590
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AA seq
476 aa
AA seq
DB search
MHGALDDTICAIATPPGEGGIGVVRISGLHACDVASQVVRLRSGKSLHDLRTHVMALADV
GSPGATRAVPYRTESRPHGVLDEALVVVMRGPHSYTGEDVVEVQCHGGPVVLDQLCRSLI
SAGARLAEPGEFTKRAFLNGRLDLAQAEAVLDTIRAKTARSLAIAQSQRRGELSREVEET
RSGLVVALAHIEAALDFAEEDIAFVRQDELLRLLDETLIKLRGLVQSGEEGRIWREGAAV
AILGRPNVGKSSLMNALLRSDRAIVTPIPGTTRDLLEEVVNIHGIPVRLFDTAGIRTTDD
PVETEGIRRSHLAWEDADLALILLDSSQPMLESDLLLLRRSEAARALLVLNKCDLPSRIS
KEDLTRVCPVSAGLFEISAKMHIGLDGLRDAISSRLMPRGLESREGVLVTNLRHAAAFER
ALQGVEQARQSVDAGRAGELVAMDLRIAADALGEITGAITTDEILERIFAEFCIGK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcatggcgcgctggacgatacgatctgtgctatcgccacccctcccggcgaaggtgga
atcggggtggtccgcatcagcgggcttcacgcctgtgatgtcgcttctcaagtcgtacgc
ctccggtccggcaaatcccttcacgaccttcgaactcatgtcatggcgctggcggacgta
ggctcccccggtgcgacacgcgccgttccgtaccgtacggaatcacgcccgcatggggtg
ctcgatgaagcgcttgtcgtcgtgatgagggggccgcattcgtataccggcgaggatgtc
gtcgaggtgcagtgccatggggggccggtcgtgctggatcagctgtgccggagcctgata
tccgcaggggccaggctggctgagccgggagagtttaccaagcgcgccttcctcaatgga
cgattggacctggcgcaggccgaggccgtgctcgataccattcgtgcgaagactgcgcgc
agtctggcgattgcccaatcccagcggcgcggtgaattgtcccgtgaggtggaggagacg
aggtcgggtttagtcgtggcgttggcgcatatcgaagcggcgctcgattttgccgaggag
gatattgcattcgttcggcaggacgaacttctgcggctccttgacgagactttgattaag
ctgcggggtttggttcagtccggggaggaaggccggatctggagagaaggcgccgcagtg
gcgattctcggacgtccaaacgtcggcaagtcgagtttgatgaatgccctgttgcggagc
gatcgcgcgatcgtcaccccgattcccggcacgacgcgggatttgttggaggaggtcgtc
aatatccacggcattcccgtgcgactcttcgacacggccggcatccgcaccacggatgac
ccggtcgaaaccgagggcattcgtcggagccacctcgcatgggaagacgcggatctggcg
ctgattcttctggacagctcgcaaccgatgctggaaagcgatctgttgttgcttcgtcgt
tcggaggctgcgcgggcgttgctggtcctgaataagtgcgatctgccatctcgcatctcg
aaagaagaccttacccgcgtctgccccgtgagcgccggtctgttcgaaatctctgcaaaa
atgcacatcgggctggatggattgcgggatgcgatcagcagccgattgatgccgaggggt
ttagagtcccgggaaggggttcttgtgaccaatctccggcatgctgctgccttcgagcgt
gccctgcaaggggtggagcaggccagacagtcggtggacgcgggacgtgcgggcgaattg
gtggccatggatcttcgcattgccgccgatgccttaggtgaaatcaccggtgctatcacc
accgatgagattctggagcggatattcgccgagttttgtatcgggaaatga
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integrated database retrieval system
