Nitrospira defluvii: NIDE0376
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Entry
NIDE0376 CDS
T01281
Symbol
rluD1
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nde03009
]
NIDE0376 (rluD1)
Enzymes [BR:
nde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NIDE0376 (rluD1)
Ribosome biogenesis [BR:
nde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIDE0376 (rluD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PaaX
Motif
Other DBs
NCBI-ProteinID:
CBK40155
UniProt:
D8PA96
LinkDB
All DBs
Position
340765..341727
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AA seq
320 aa
AA seq
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MQTEFIISAGEQPKRLDVFLVQREPKLSRAALQRMITAGWVRVNSHIAKSSQRIRAGDVI
VFDTPQPAPLRIAGETQQLEVLFEDHACLVLNKPAGIVTHPSPGHWSNTLLNALLDHCAR
GGGAATPGVVHRLDKDTSGVMVVAKTEEAHRKLSEQFERHSITRQYEALVVGVPAQSEGR
IEAALGPDRHHPKRTSTQTLQPKPAVTDYRVEEVFDKVAARLVLSPHTGRTHQIRAHLHV
IGHPILGDRSYGGERVGAIAGYEIPRVMLHARTLGFRHPATGLYGEWTADVPPDFQAVRQ
GLYAGRPFAPMGDERLEREA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggaatttatcatctccgccggggagcagcccaaacggttggatgtcttcctc
gtacaacgcgagccgaagctctcgcgcgcggccttgcagcggatgattacagcgggctgg
gtgcgggtgaatagtcacatcgccaaatcgagtcagcgcatcagggctggagatgtcatt
gtctttgatactccccagccagccccattacgcatcgctggcgagacacaacagttggag
gtcctgtttgaggatcatgcgtgtctggtgctgaataagcccgccgggatcgtgacccac
ccgtcccctggacattggtccaatacactgctgaatgcattgctggaccattgcgcccgc
ggaggcggggccgcgacaccgggcgtcgtgcatcggttggataaagacacatccggagtg
atggtggtggccaagacagaggaggcgcaccgaaaactgtcggagcagttcgaacggcat
tccattacccgtcagtatgaagcgctggtcgtgggtgtgccggctcaatcggaaggccgg
atcgaggcggcgcttggtccggatcggcaccatcccaaacgcacctcaacccagacgctt
cagccgaaacctgcggtcacagactatcgagtcgaagaggtgttcgacaaggtggccgcc
cgcctcgtgctcagtccacacacaggtcgcacgcaccaaataagggcgcatcttcacgtc
atcggccatcccatcctcggtgaccgatcctacgggggtgagcgagtcggtgcgatagcg
gggtatgagattccgcgggtcatgctgcatgctcgtacgctggggttcaggcatcctgcc
accgggctgtatggcgagtggacggccgacgttccgcctgattttcaggccgtacgacaa
gggctctatgccgggcggccattcgcgccgatgggtgacgagcggttagagcgagaggcc
tga
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