Nitrospira defluvii: NIDE0426
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Entry
NIDE0426 CDS
T01281
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
nde
Nitrospira defluvii
Pathway
nde03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NIDE0426 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nde03011
]
NIDE0426 (rpsA)
Ribosome [BR:
nde03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NIDE0426 (rpsA)
Bacteria
NIDE0426 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
DUF2110
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CBK40203
UniProt:
D8PAE4
LinkDB
All DBs
Position
386985..388700
Genome browser
AA seq
571 aa
AA seq
DB search
MSTVTPQSEPKLDRDALAAMYEETFRNFEEGTITEGMVVAIGKDKVVVDIGYKSEGMIPA
DQFSHEELAQLKVGDRLQVYLEECEDADGNLVLSKEKADKMKIWEELETLHKEEKSIEGK
IISRIKGGMMVDIGVKAFLPGSQIDLHPVRDLDGLVGKTFPLKIIKINHRRGNVVVSRRV
LLEETRDRRRQTTLSTLKEGQLIQGTVKNITDYGAFIDLGGIDGLLHITDMSWGRVGHPS
ELFQVSDKVEVTVLKYDRETGRISLGLKQKSADPWTGVAAKYPVGTRVRGRVVSLTDYGA
FVELEPGVEGLVHVSEMSWTHEVRHPSRVVSVGDQVEAAVLNIDPGSRKISLGMKQTAPN
PWDMIEAKYPAGTRIEGKVKSLTDFGAFVGLEEGIDGLIHISDMSWTKHIKHPSELFKKG
QKVDAVVIRIDKEKERLSLGYKQLSRDPWEEQIPNKYRVGDSITGKVSKIADFGLFIELD
GDVEGLIHISEVGLDANVRMEEKFKPGDDVTAKIIKVDRDERKIALSLRDHQMDSDRRQV
DEFHASQGGIDQTLGRAAKQSRKRNQSDSEA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtcacaccgcagagtgaacccaagctggatcgcgacgccttggcggcgatg
tatgaagaaaccttccgcaattttgaggaagggaccatcaccgagggtatggtcgtggcc
atcggcaaagacaaagtcgtggttgatatcggctacaagtcggaaggcatgattcccgcc
gaccagttctcgcatgaagagttggcgcaattgaaggtgggagatcgcctccaggtgtat
ctcgaagagtgtgaagacgcggacggcaatctcgtgctctccaaagaaaaagccgacaag
atgaaaatctgggaggaattggagacgctgcataaagaagaaaagagcatcgaaggcaag
atcatttcccgtatcaagggcggcatgatggtcgacatcggcgtcaaggcattcttgccc
ggttcccagatcgatctgcatccggttcgcgatctcgatggactggtcggcaagaccttc
cccctcaagattatcaagatcaatcatcgtcgcggcaacgtggtcgtctcccgacgggtc
ttgttggaagagacgcgcgatcgtcgacgtcagacgacgctgtccacgttgaaggaaggt
cagttgatccagggcacggtcaagaacatcaccgattacggagcgtttatcgatctcggc
ggcatcgacggattgctgcacattaccgatatgtcttggggccgtgtggggcatccgtcc
gaattgttccaggtcagcgacaaggtcgaagtcaccgtgctgaagtacgatcgtgaaacc
ggccgtatttcattgggcctcaagcagaagtcggcagatccctggaccggggtggcggcg
aagtacccggtaggcacgcgcgtccgtggtcgcgtggtgagcttgaccgactatggcgcc
ttcgttgagctggagcctggcgtggaaggattggtccacgtgtccgagatgtcctggacg
cacgaagtgcggcatccgtcgcgcgtcgtttctgtcggtgatcaggtggaagccgctgtg
ttgaacatcgatccgggaagtcggaagatttcgctcggcatgaagcagaccgcaccgaat
ccgtgggacatgatcgaagcgaagtacccggctggaacgcggatcgaaggcaaggtgaag
agcctgaccgatttcggcgcgttcgtcggattggaagaaggtatcgacgggctgatccac
atttccgacatgtcctggacgaagcacatcaagcatccgtcggagctcttcaagaagggc
cagaaggtggatgcggtcgtgattcgtatcgacaaggaaaaggaacggctctcgctgggg
tataagcaattgtcccgcgatccgtgggaagagcagattcccaacaagtatcgggtcggc
gatagcattaccggcaaagtcagcaagatcgccgatttcggactcttcatcgagctcgat
ggcgatgtcgaggggctgattcatatcagcgaagtcggactcgatgccaacgtgcgtatg
gaagaaaagttcaagccgggcgatgatgtcacggcgaagatcatcaaggtggatcgcgat
gagcggaaaattgcgctcagcttgcgcgatcaccagatggattccgatcggcgccaggtc
gatgagttccacgcctcacagggcgggatcgatcaaaccctgggtcgcgcggccaagcaa
agccggaagcggaaccagagcgattccgaagcctag
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