Nitrospira defluvii: NIDE0434
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Entry
NIDE0434 CDS
T01281
Name
(GenBank) putative D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
nde
Nitrospira defluvii
Pathway
nde00550
Peptidoglycan biosynthesis
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIDE0434
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nde01002
]
NIDE0434
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
NIDE0434
Enzymes [BR:
nde01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NIDE0434
Peptidases and inhibitors [BR:
nde01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
NIDE0434
Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NIDE0434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CBK40211
UniProt:
D8PAF2
LinkDB
All DBs
Position
393663..394592
Genome browser
AA seq
309 aa
AA seq
DB search
MNRSRRTLSIRAFGVLTLLFGLWSGQALAVDSDVDDEVITVPFDPRPVPSAKQANHSLRW
RHVPAHSILLKELKTGTTLYQFESEKRLSPASLTKIMSALVILEYGHLDDEVTVSPKAAR
AHKTHLRLRTGQIFRLEDLLKAMLIVSANDACLAASEHVGGDEARFVDLMNAKAAALQLH
NTHFSNACGFDAPEHYSTAEDLAKLSEIALHHPVFKELVREEREIIMPINEHRAYVLRTT
NRLLGRIPGVQGVKTGFTSKAGRCLIAKVSQDGSDLLLVILNSKRRWNTATSLINYGLRL
SDSRAGLAR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttcgcgtcgaaccctttcgatccgtgccttcggagttctgactctgttgttc
ggcctttggagcggtcaggcgctggccgtcgacagcgacgtcgacgatgaagtcattaca
gtgcccttcgatccgcggccggtcccgtccgccaagcaagcgaatcacagtctgcgatgg
cggcacgttccggcgcatagcatcctgctcaaggaactcaagacgggaaccactctctac
caatttgaaagtgaaaagcggctgtccccggccagtctgaccaagatcatgtcggccctg
gtcatcctggagtatggccatctggatgacgaggtgacggtcagccccaaggcggcgcgc
gcacacaagacgcatctgcgtttgcgaaccggtcagatttttcggctggaagatttgttg
aaggccatgttgatcgtgtctgcgaatgacgcctgcctggctgccagtgagcatgtcggc
ggggatgaggcccgtttcgtcgatctcatgaatgccaaggctgcggcgctccaattacac
aatacccatttcagcaatgcgtgcggatttgatgcgccggaacattattcgacggcggag
gatttggccaagttgagcgagatcgccctgcaccaccccgtctttaaggagttggtacgt
gaagagcgtgagatcatcatgccgatcaatgaacatcgggcgtatgtcctgcgcacgacc
aaccggcttctggggcgtattccgggagtgcaaggggtgaagacgggattcacgtccaag
gcaggccgatgcctcatcgcgaaagtctcccaagacggcagcgacttgctgctcgtcatt
ctcaattccaagcgtcgctggaacacggcgacgagcctcatcaactatggcctgcggctt
agtgatagccgggctggtcttgcccgttaa
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