Nitrospira defluvii: NIDE0443 Help Entry NIDE0443          CDS       T01281                                  Symbol rpoD Name (GenBank) RNA polymerase sigma-70 factor   KO K03086   RNA polymerase primary sigma factor Organism nde  Nitrospira defluvii Pathway nde02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:nde00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     NIDE0443 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nde03021]     NIDE0443 (rpoD) Transcription machinery [BR:nde03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      NIDE0443 (rpoD) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_25 Motif Other DBs NCBI-ProteinID:  CBK40220 UniProt:  D8PAG1 LinkDB All DBs Position complement(401142..402401) Genome browser AA seq 419 aa AA seqDB search MKDALAIQDDTDPTVAAEVDPDADDPEASTLLDSIVQGDQAETDADSEDAAPEKPARSAS SPFLLESLYFRSFGERPLLERDEEIALAKQLDLGTRQIRLTLQQAVKAGGRLKRTDRTTE CLETLKTVRRLSGLSATALNQAERALDDLQLDATTGGRVPVSVRKELDAALSQLKASRIT LETAKDELVRCNLRLVVNVAKHYTGRGLTLLDLVQEGNIGLMKAAERYQHRKGFKFSTYA TWWIRQGITRSLADQSRTIRIPVHQTEASNRILRASRRLVQQLGRQPRLEEVASTMRMRP DRLHETIQAFQEPVALEHRVGDGGTELGELLPDQQAVPPDAHVNRTELTREMDRILGTLT PREQTVIRLRFGIGEDQARTLEQVGQHLSVTRERIRQIEAKALKKLKTPMVKEMFAAIK NT seq 1260 nt NT seq  +upstreamnt  +downstreamnt atgaaagatgcgctcgcgattcaagacgatacagacccgacggttgcggctgaggtggac ccggatgccgatgacccggaagccagcacgctgctggacagcatcgtgcaaggcgaccag gcggagaccgacgcagactccgaggacgccgcgcctgagaagcctgcgcgctcggcctct tcgccgtttctcctggaatccctctacttccgttcgttcggcgaacgcccgctgctcgaa cgggatgaagagattgccctggcgaaacaacttgacctcggcactcgccaaatccggctg acccttcaacaagcggtcaaagccggcggccgcctgaaacgaaccgaccgcacgaccgag tgcctcgaaacactcaaaacagtccgccgtctgagcggcctctcggccactgccctcaat caggcggaacgcgcactggacgatcttcaactggacgccaccaccggtggcagagttccc gtgtcggtccgcaaggaactggatgcggccttgtcgcaattgaaggcctcacgcatcacc ctggagacggccaaagacgagctggtgcgctgcaaccttcgcttagtcgtgaatgtggcc aagcattacaccggccgcggcctgactctgttggatctggtccaggagggtaatatcgga ttgatgaaagccgctgagcggtaccagcaccggaaggggttcaagttcagcacctatgcg acgtggtggatccggcagggtatcacccgatccctggccgatcagtcacgcacgatcaga attcccgtgcaccagacggaagcttcgaaccgcattctccgggcctcgcgccgtctcgtc caacagttgggacgccagccacgtcttgaggaggtggcttcgaccatgcggatgcgacct gatcggctgcatgagaccattcaggccttccaggaaccggtggcgttggagcatcgggtc ggtgatggcggcacggagctcggcgagctgctcccggaccagcaggcggtcccgccggac gcgcatgtgaaccgcacggaactcacccgtgaaatggatcggattctcggcaccttgacg cccagagaacaaaccgtcatccggttgcgcttcgggatcggagaagatcaggcgcgcacg ctggaacaggtcgggcagcatctgtcggtcactcgcgaacggattcgacagatcgaggcc aaagcgctgaagaaactcaagaccccgatggtcaaggaaatgttcgcggcgatcaagtaa

DBGET integrated database retrieval system