Nitrospira defluvii: NIDE0546
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Entry
NIDE0546 CDS
T01281
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE0546
Transporters [BR:
nde02000
]
Other transporters
Pores ion channels [TC:
1
]
NIDE0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
CBK40321
UniProt:
D8PAR2
LinkDB
All DBs
Position
complement(494511..496511)
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AA seq
666 aa
AA seq
DB search
MLTAVLTVSMTGEAWAESAAPDRPEPAATAISEELELLKEEETVSIASRYEQPISQAPSN
VYVITDEDIRMSGTTDIPTLLRRIPGLEVMQTSGADFNVSVRGDNQTNANKLLVMVDGRS
IYNDLQGTINWKLLPVTLPEIKRIEVLKGPASAVWGFNAFDGVINIITKSPEEMKGTTLQ
FGGGSYGTIMASAIQAGTVDKFGYRLSIGHNQNASWNNSSALAFRDNLVNVLTEYALSAD
SKIRISGGLVDSNANNPIVSQDVTLSNKSAQSYAKVEYERQDFLVRAFWNQYTSNSAYTF
QPPLAPFLSYSSGNGSPTTIFTANTYNVEIQHSVGPFSGNRLTYGVNYRLNTLSGNAITQ
YTTENRLGFFVQDEWKVAEPFTVVAGVRYDLDTFISPTISPRVSLFYAPSSDHIFRLSSS
VAYRPPTMLENQSNAFVNTNPPLPPVATTIAGRQNLSPEQIISYDLGYQGWYWRHRLRVR
ADVFYNHTSDLISVRNQSATLAVFSNDIGSADIYGGEVGFEVLATKWLTGFANYSYQEIH
QTFTGRVQRAGPHNKFNVGLRGEWDNGVNAEAIFHYYGATNYPPGQSFTTFSQAGLVTLP
NPDVGAYNLFNLRAGYRFWQQKAAAGYMRDAEVAVSVFNALNDEHKEYPLGDLISRRMMG
WVTVRF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggccgtgctgacggtcagcatgacgggcgaggcatgggccgaatccgctgca
cccgatcggccagagccggctgcgaccgccatcagtgaagaattggaactgctgaaagaa
gaagaaaccgtcagcatcgcgagccgctatgagcagccgatctcgcaggctccgtccaat
gtctatgtgatcaccgacgaagacattcgcatgtccggcacaaccgatattcccaccttg
ctccggcgcatccccggcctggaagtgatgcagacaagcggggccgacttcaacgtcagc
gtgcgaggggacaaccaaaccaacgctaacaagctactggtgatggtggatgggcgctcc
atctataacgatctgcaaggcaccataaactggaaactcctgccggtcaccctgccggaa
atcaaacggatcgaagtcttgaagggaccggcctctgctgtctggggcttcaacgccttt
gacggcgtcatcaatatcatcaccaaatcgccggaagagatgaagggcacgacgttacag
tttggcggaggcagctatggaaccatcatggcttccgcgatccaagcgggaacggtggac
aagttcggataccggctttccatcgggcacaatcaaaatgcctcgtggaacaatagcagt
gccctggcctttcgcgacaatctcgtcaacgtcctgaccgaatatgccctctcagcggac
tccaagattaggatttccggcggacttgtggactccaatgctaacaatcccattgtaagc
caggatgtcactctttccaacaagtccgctcagagctatgccaaagttgaatacgaacgc
caggacttcctcgtcagagcattctggaatcaatacaccagcaattcggcctacacattc
cagcctccccttgcacctttcctgagttacagttcaggaaacgggtcgccgactacgatt
tttacggcgaacacctataatgtcgagattcagcattcggttggacccttttcgggcaat
cgcctgacatatggcgtgaactaccgccttaacacgctttcgggcaatgccatcacccaa
tacaccacagaaaaccgactcggcttcttcgtacaggatgaatggaaagtcgccgagccc
tttacggtcgtcgccggggttcgatatgacttggacacgttcatcagccccaccatcagc
ccccgcgtgtctctgttctatgctccgtccagcgatcatattttccgactgtctagttca
gtggcctatcggccacccaccatgctggaaaaccagtcgaatgcattcgtgaacacgaac
ccgcctctaccgccggtcgcaacgactattgccggaaggcagaatctctcgcctgaacaa
attatttcttacgacttgggctaccaaggctggtattggcgtcaccggctcagggttcgc
gccgacgtgttctacaatcacacctcggatctgatcagcgttcgcaaccaatccgcgaca
ctcgcagtcttcagtaacgacatcggctcggcggatatctatggcggcgaggttggcttc
gaagtgctggccactaaatggctcaccggttttgcgaactactcctaccaggaaattcat
caaacgttcaccggccgtgtgcaacgcgcagggccgcacaacaagttcaacgtcggattg
cgcggcgagtgggacaacggcgtcaacgccgaggccatcttccattactatggagcgacc
aactatccgccaggtcagtcatttacaacgttctctcaagccggtctcgtcacccttccg
aatccagacgtcggtgcatacaacctgtttaatctccgcgccgggtatcgattctggcaa
cagaaggccgcggccggatacatgcgcgatgccgaagtggcggtctcggtcttcaatgcg
ctcaatgacgaacacaaggaatacccgctgggcgacctcatcagccggcggatgatgggc
tgggtcaccgtgagattttga
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