Nitrospira defluvii: NIDE0547
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Entry
NIDE0547 CDS
T01281
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE0547
Transporters [BR:
nde02000
]
Other transporters
Pores ion channels [TC:
1
]
NIDE0547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
CBK40322
UniProt:
D8PAR3
LinkDB
All DBs
Position
complement(496555..498504)
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AA seq
649 aa
AA seq
DB search
MICCGAIGAQAQDTSPSLTAPVAPVSEELELLKEEETVSIATRHEQPISQAPSNVYVITD
EDIRHSGATDIPTVLRRVPGLDVMQVTGADFNVSARGDNQLFANKILVMVDGRSIYIDGQ
GLVFWKSLPVTLPEIKRIEVLKGPASVVYGFNAFDGVINIITKSAQDMKGTTLQFGGGEL
GTISSAAVQAGSAGKLDYRLSIGHDQNQQWRNSDALAFRSNKFNVQTQYNFSGDATLRVA
GGFIDTNRFDGPVSNVQIPRSQFNQGYTDVHYQYRNFSVRGWWQGNDIPVDSATHPLLSQ
FVRQTNATGGPNVSFTTNTYNIEAQHSLEFGSSNRLSYGVNYRYNTVDGSAVSELGREDR
FGVHLQDEWKIRPSLILVAGVRYDLHTRINGTWSPRVALVYNLTPEHTFRISGSVAYRPP
TLFESNLDLRILPTVPPLFAPIPLLGSQKLNPEQIISYEAGYQGWWMKHRLRTRLDLFFN
HLSDLINFQTVGTARTLVNGGEADIYGTEAGLEFLATRWLSGFANVSYQKIGQTFTGVSR
RGGPDWKANVGLRGDWDNGFNSEIAVHYVASATYPLIEFFTALAPVLPAPTSPTVDSYTL
LNLRGGYRFWHDKAEVAVAVYNALSDKHKEHPLGDTLGSRVMGWVTLRF
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttgatctgctgcggggccatcggcgctcaggctcaggacacatcgccttctttgaccgcc
cccgtagcaccggtcagcgaagaactcgaactgctcaaagaggaagaaaccgtcagcatc
gccactcgccatgagcaacccatctcgcaagcaccctccaacgtctacgtcatcaccgac
gaggacatccggcactcaggcgcgaccgatattcccactgttctccgccgcgtacccggg
ctggatgtcatgcaagtcaccggggcggacttcaatgtcagcgcgcgcggcgacaatcaa
ctcttcgccaacaaaattctcgtgatggtggacggtcgctcgatctacatcgacggccaa
ggtctggtgttctggaaatcgcttccggtcaccctcccggagattaaacgcatcgaggtg
ctgaaagggcccgcctctgtcgtctacggcttcaatgccttcgacggagtgatcaacatc
atcacgaaatccgctcaggacatgaagggcacgacgttgcagttcggcggcggggaactc
ggcaccatctccagtgccgccgtccaggccgggtcggcgggcaaactcgactaccgtctc
tccatcggccatgaccagaatcaacaatggcgcaacagcgacgccctcgccttccggtcg
aacaaattcaacgtgcagacgcagtacaacttctccggtgacgccaccttgcgcgtagcc
ggagggttcatcgataccaatcgtttcgacggccccgtttcaaacgtccagattcctcgt
tcccaattcaatcaaggatatacggacgtacattaccagtaccgcaatttctccgtgcgc
ggctggtggcagggcaacgacattcccgtcgactccgccacccatccgctcctctcgcaa
tttgtccggcagacgaacgcgaccggcgggcccaatgtgtcgttcaccacgaacacctac
aacatagaggcacaacacagcctcgaattcggctcgtccaaccggttgagttatggcgtc
aattatcgttacaacacggtcgacggcagtgccgtctctgaattaggacgagaagatcgt
ttcggggtccatctccaggacgagtggaagatacgtccctcgctcatcctcgtagcgggg
gtccgctacgacctgcacaccagaatcaacggtacctggagcccgcgtgtcgccctcgtc
tacaacctgacgccggagcatacgtttcgtatcagcggctcggtcgcctatcgccccccg
acgctattcgaatcgaatcttgaccttcgaatcctgccgaccgttccaccactattcgca
cccatcccgctgctgggctcacagaaactcaatcctgagcaaatcatttcctacgaagcg
ggataccagggctggtggatgaaacaccggctccggaccaggctcgacctcttctttaat
cacctctccgacttgatcaacttccaaaccgtcggcaccgcgcgcacactcgtcaacggc
ggtgaggccgacatctatggcactgaagcgggactggagttcctcgccaccagatggctc
agcggctttgcgaatgtgtcctaccagaaaatcggacaaaccttcaccggcgtctctcga
cgcggcggcccggactggaaagcgaatgtgggcctccgcggtgactgggacaacggcttc
aattcagaaatcgcggtgcattacgtcgcaagtgccacctatccgttgatcgaatttttc
accgcgctcgcgccggtgctgcccgcgccgaccagtccgacggtcgatagttataccctg
ctgaacctgcggggcgggtaccgattctggcacgacaaggccgaggtggccgtggcggtc
tacaacgcgctcagcgacaaacacaaggaacatcccttgggcgatacgctcggcagccgg
gtgatgggttgggtcacgctcaggttctga
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