Nitrospira defluvii: NIDE0638
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Entry
NIDE0638 CDS
T01281
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE0638
Transporters [BR:
nde02000
]
Other transporters
Pores ion channels [TC:
1
]
NIDE0638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CBK40410
UniProt:
D8PB01
LinkDB
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Position
607876..610134
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AA seq
752 aa
AA seq
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MKERGWSLFAVGCLATMVLGVSIDQSIARAAEEPSGQEAPVVVVDPVEVRGKRIENVEDV
KQELARRPGSNILIEEKQITESRAINLQDVLQFSPGVRFQSRFGADEGQFQIRGTSLRNN
FHHRGINILINGIFFGDADGFSDFESIDLLAYERIEVYKGANALRYGANSIGGAINFVPR
TGYSASTMQLRMLGGSFGMVSGQVSSGKVLKPFQVGNMSATMDYYISVSGNRQDGFQDNS
QQARERINANIGLQLGNHQEIRAYFLQANVAERIPGSLTNQQLFFNRQQTGGQSPAGAPP
FFACVSSNQACNWGRYYTLQRIGIAYHNEFAPNQFFEIIPYFSNQFVDHPIFQTIRQENN
NVGGEFRYVNSNSLFGKNNSFVAGFQPRYGNQRQQRFVNINGSIGAMTQNYTAKTTYFGA
YAEDAFDATKDFTIVIGGRWDYTGREATVDNFGPAGNPFNPNTPSTPTGTQKPLQHFGAI
SPKVGFVYRTTPTSQLYFNASRAYEAPLNVELLSSLNANGSANTGFLNLDAQRAWQLELG
HRGTSADKRYSWDVTVYNLEMQKEILASNINNQGTFQNANGTRHTGVEAGGGMVLKKGLF
AQGGAGKEDSLQTRVAYTWSRFKFTDDVRGGGIGGPNVLIAKDGNTVAGAPEHSLNMEVR
YDHPSGWWIAPNVEWSLSGFYTDYNNTIKNPSYALINMRSGWNIDEHWTLFAEGRNLTNK
TYAGAVVVNDSLNRFANPGFGISAFGGVEYKF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaggggttggagcttgttcgcagtcggttgcctggcaaccatggtgttagga
gtgagcatcgatcagtcgatcgcgcgggcggccgaggagccgtccggtcaggaggcgccg
gttgtcgtcgttgatccggtggaggtgaggggaaagcggattgaaaacgtcgaggatgtg
aagcaggaacttgcccgccggccgggcagcaatatcctgatcgaggaaaagcagattacc
gagtcgcgcgcaatcaacttgcaagacgtgttgcagttctcgccgggcgttcggtttcaa
tcgcgatttggcgccgatgaaggacagttccaaatccggggcacttcgttgcgcaataac
ttccaccatcgcgggatcaatattctcatcaatggaatcttcttcggcgatgccgacggg
ttttcggattttgaatcgatcgacctgttggcctacgagcggatcgaggtctacaagggc
gcgaacgccttgcggtatggagccaacagcatcggcggcgcgatcaatttcgtgccgcgt
accgggtatagcgcctcgaccatgcaattgcggatgttggggggcagcttcgggatggtc
agcgggcaggtatccagcggcaaagtgctgaagccgttccaggtaggcaacatgagcgcc
acgatggattactacatcagcgtgtccggtaatcgccaggatggatttcaagataacagc
cagcaggcccgtgaacgcatcaatgccaacatcggtctgcaactcggcaaccaccaggag
atccgggcctatttcctccaagccaatgtcgccgagcggattcccggctccttgaccaat
cagcagctgttcttcaaccggcagcaaaccggagggcagagtcctgccggggcaccgcct
ttctttgcctgcgtgtcgagcaatcaggcctgtaactggggccggtactacacgttgcag
cggatcgggatcgcgtaccataacgagttcgcgccgaatcagtttttcgagatcattccg
tacttctcgaatcaatttgtcgaccatccgatttttcaaacgatccgacaggaaaataac
aacgtcggcggtgagttccgctatgtgaactcgaacagcctgttcggaaagaataactcc
ttcgtcgccgggttccagccgcgctatggcaaccaacggcaacagcgtttcgtgaacatc
aacggcagcatcggggccatgacgcagaactacaccgcgaagaccacgtatttcggcgcc
tatgccgaagacgccttcgatgcgaccaaagatttcaccatcgtcatcggcgggcgctgg
gactataccggacgcgaggcgacggtcgataacttcgggccggcggggaatccgtttaac
cccaatactccctccacgccgaccgggacgcagaaaccgttgcaacatttcggagccatc
agtccgaaggtcggctttgtctatcgcacgacgccgacgtcccaactgtacttcaacgcc
agccgggcgtacgaagcgccgcttaacgtcgaattgttgtcgtcgctcaacgccaacgga
tcggcgaacactggattcctgaacctcgacgcccaacgcgcctggcagttggaattgggc
caccgcggcacctcggcggataagcgctacagctgggatgtgaccgtctacaacctggaa
atgcagaaagaaattctggcgtcgaacatcaataaccagggcaccttccaaaacgccaat
gggacgcgccacaccggcgtggaagcgggcggaggtatggtgttgaagaaaggcttgttt
gcgcagggcggtgccggtaaggaagacagcctgcagacccgcgtggcctatacctggtcg
cggttcaagtttaccgacgatgtgcgaggcggcgggatcggcggcccgaatgtgctgatc
gcgaaggatggcaatacggtcgccggtgcaccggaacatagtctgaacatggaggtgcgg
tacgatcacccctctggttggtggatcgcaccgaacgtcgaatggtcgttgtcgggtttc
tatacggattacaacaacacgatcaagaatccctcctatgccttgatcaatatgcggtcg
ggatggaacatcgatgagcactggacgctgtttgccgaaggtcgcaatttgaccaacaag
acctatgccggggccgtcgtggtcaatgattcgctgaatcgtttcgccaatcccggattc
gggatcagcgcattcggaggagtcgaatataaattctaa
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