Nitrospira defluvii: NIDE0648
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Entry
NIDE0648 CDS
T01281
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE0648
Transporters [BR:
nde02000
]
Other transporters
Pores ion channels [TC:
1
]
NIDE0648
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
E1_FCCH
Motif
Other DBs
NCBI-ProteinID:
CBK40420
UniProt:
D8PB11
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All DBs
Position
621681..624023
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AA seq
780 aa
AA seq
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MMSRKIVQHGVAGMMLVCGWLVGSTWAQSEPSSSTPGTMESEAVLRERLQQNGNEREQLL
RQLEDLSRIRDEALPANEKPQRYQEAAVPQSDGVDAPEAVPVYDLADISIVSKRVQKHPE
GLAFSATPRTETDSQPTRTMKEAMESLPGVILRSANGPRDFGVSIRGSGVKTTGVVRDLK
FYEDGIGQTQSDGFSRLDMHDPWFMQSVEVTRGAASSLYDNAALGGMIHFKTRRGGDING
LETFLSGGSYGYQKYGVAVGREYGDVDIAVFASQVAEDGYLRHSDYNTQTVNLNFRFKLG
DKDNFYVKAVTNALNANVPTRLTLAQFNADSRQAGGTGFGNDPLRLAQRRLDRRTVIGGL
YERQLDANTVFTLEADYDVRDINQTFTQINDAFYPNFKGYADLRHDGRLGDMPLKSYVGF
FANNMEQESQTFENLGDFRGTRGTLVQNSRGTIRNIGGRVREELEFIPKWTLAAGVGFQQ
SQISVQTINYTAGALASTPGADRTFYNWAPEVSLSWRPTESQRHWVRASTGYSVPGFANL
TTGLDGLAGTNFSIKPQKNYNFEIGTDTKLHSTFGVQLVGFWVLVKDEIITQVNSTTAGA
FAINADSSQYRGIEASYDWRPSPGWRFSGAYTHIDAQYINFADQFRVNGAGPITQILRDG
KQVPNVARDVLNFKEEYEHPSGWGGWFETTYWNSYFLNNNNTVGAPAYWLLNANLHKTIE
LKPTSWFRFAKFYLQLDNIADKRYVGSGGVIADSTPDANKTLFFAGYGRAIYGGVTLGLF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacggaaaatcgtgcagcacggggtcgcgggaatgatgctggtatgcggttgg
cttgtgggttccacctgggcccagagcgaaccatcgtcatcgacgccgggcacaatggaa
tcggaggcggtcttgcgcgaacggcttcagcagaatggaaatgagcgagagcaactcctc
cggcaattggaagatctcagccgcatccgagatgaggccttgccggcgaatgagaaaccc
cagcgttaccaggaagcagccgtgcctcagtccgatggagtcgatgcgcccgaagcggtt
ccggtgtacgacttggccgatatcagcatcgtgagcaagcgggtgcagaaacatccggag
gggctggccttctcggcaaccccgcgcacggaaaccgattcgcagccgacgcgcacgatg
aaggaagcaatggagtcgctgccaggtgtgatcctgcgttccgccaacggaccacgggat
ttcggcgtgtcgatccgcggctccggtgtcaagacgaccggtgtcgtgcgtgatctgaag
ttttacgaggacggcatcggccagacgcaatccgacggattctcccgcctggatatgcat
gacccgtggttcatgcaaagcgtggaggtcacgcgcggcgcggcctcgtcgctgtatgac
aacgcggcgctgggcggcatgattcactttaagacgcggcggggcggtgacatcaacggg
ctggaaacatttctaagcggaggctcgtacgggtaccagaagtatggcgttgccgtcggc
cgtgaatacggcgacgtggacatcgccgtgttcgccagccaggttgcggaggacggctat
ctccggcacagcgattacaacacacaaacggtcaatttgaatttccgattcaaactgggg
gacaaggataatttctacgtcaaggctgtcacgaatgccttgaatgcgaacgtgccgacg
cggctgactcttgcgcagtttaatgccgactcccggcaggccggcggcaccgggttcggt
aacgatccgttacgtctggctcaacggcgccttgatcggcggacagtcatcggcgggttg
tacgagcggcaactcgatgcgaacaccgtattcacgttggaagccgactacgacgtgcgc
gatatcaatcaaacctttacgcaaatcaatgacgccttctacccgaactttaagggatat
gcggatcttcggcacgacggccgtctcggcgacatgccgctcaaaagttatgtagggttc
ttcgccaacaatatggagcaggaatcgcaaacgttcgagaatctcggtgactttcgcggc
acgcgcgggacgctggtgcaaaacagtcggggtaccatccgcaacatcggcggacgagtg
cgagaggaattggagttcatcccgaagtggaccctggcggccggtgtcggcttccaacag
tcgcagatcagcgtgcagacgattaattatacggccggagcgctcgcctcgactcccgga
gcagatcgcaccttttataactgggcgccggaggtgtcgctgtcctggagaccgaccgag
tctcagcggcattgggtccgggcctcgaccggctattccgtgccgggcttcgccaatttg
accactggtttagatgggctcgcagggacgaatttttcgatcaagccacagaagaactac
aatttcgaaatcgggaccgacacgaaactgcacagcacgttcggcgtccaattggtcggg
ttctgggtgctggtgaaagatgaaatcatcacccaggtcaactcgacgacggcaggtgcc
tttgcgatcaatgcggattcctcccaataccggggcatcgaggccagttacgattggcgt
ccctcgcccggctggcgtttctccggagcctatacacacatcgacgcgcagtacatcaac
ttcgccgatcagttcagggtgaacggggcgggtccgatcacgcagattttgcgggacggc
aagcaggtgcccaacgtggcgcgcgacgtgctgaatttcaaggaagagtacgagcatcca
tccgggtggggcggttggtttgagacgacctattggaacagctatttcttgaacaacaac
aataccgtgggcgcgccggcctattggttgttgaacgcaaatctacataagacgattgag
ctcaaaccgacctcctggttccgttttgcgaagttctatctacagttggataacattgcc
gataagcggtacgtgggctcgggcggcgtcattgccgacagcacgccggatgcgaacaag
acgttgttcttcgccggctacggccgggccatctatggcggcgtgacgctgggattgttc
tag
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