Nitrospira defluvii: NIDE0759
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Entry
NIDE0759 CDS
T01281
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nde
Nitrospira defluvii
Pathway
nde00470
D-Amino acid metabolism
nde00550
Peptidoglycan biosynthesis
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIDE0759 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIDE0759 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
NIDE0759 (murD)
Enzymes [BR:
nde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NIDE0759 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
Precursor biosynthesis
Amino acid ligase
NIDE0759 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
NAD_binding_7
Pyr_redox_3
2-Hacid_dh_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
CBK40526
UniProt:
D8PBB7
LinkDB
All DBs
Position
724445..725833
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AA seq
462 aa
AA seq
DB search
MNVKDLQVTVVGLARSGVGAARLLNHLGARVTLADRKEAQELTAILSQVDRSSIAVKVGA
QYESALEGADLVVISPGVPTHLDALNRVRARGVRVIGELELASRFLTAPVVAVTGTNGKS
TTVTLIGKFLQESGKRAFVGGNLGIAASEAALTSVQAKAGSAAPYEYVVLEVSSFQLETT
EQFHPWIAAILNVTLDHMDRYASVEDYVAAKATIFANQTAGDYSLFNLDDARVAALRGRT
KGTVLGFSRSGATVSGVAGATVLDGDLIVTTVRGRREEICRRSDMRLIGLHNVENVMAAV
TYGLLCGCSIEAVRAVLRSFPGLEHALEVVRERRGVRFVNDSKGTNVDAVLKALEGIDQP
IWLIAGGRDKGGDFSRLERAIRERVKGLILIGEAAGRIQAAMGDFDRCRPAATLRDAVEL
AAREAQPGEVVLLSPACASFDMFADYQDRGRQFKALVQGLPA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtgaaagatctccaagtcacggttgtcggactagcccgaagcggagtgggcgcg
gcacgcctgttgaaccatctgggagcccgggtcaccctggccgaccggaaggaggcgcag
gaactgaccgccatcctgtcgcaggtggaccggtcgagcatcgccgtgaaggtgggggcg
cagtacgagtccgcgcttgaaggggccgatcttgtcgtgatcagcccgggtgtgccgact
catctcgatgcgctcaatcgtgtgcgggctcgcggggttcgggttatcggggaactggag
ctggcctcccgctttctgacggcgccggtggtggccgtgaccgggaccaacgggaagagc
acgacggtgacgctgatcggcaagtttctacaggagagcgggaaacgcgccttcgtcggg
ggcaatctcgggatagcggccagcgaggcggcattgacctctgttcaggcgaaggcgggg
agcgccgctccctatgagtatgtcgtgctggaagtctccagtttccagctcgagacgacc
gagcagttccacccctggatcgctgcgattttgaacgtgaccttggaccacatggatcgt
tacgcctcggtggaggactatgtggcggcgaaggcgactatcttcgccaaccaaacggcc
ggcgactattccctgttcaatctcgatgatgcgcgcgtggccgcgcttcgcgggcgcacc
aagggcaccgtcctgggcttcagccgcagcggcgccacggtgtcgggggtggcgggggct
acggtgcttgacggcgacctgatcgtgacgacggttcgcgggcggcgggaggaaatctgt
cgccggagcgacatgcggctgatcgggctgcataacgtcgaaaatgtgatggcggcggtg
acgtatggtctgctctgtggctgttcaatcgaggccgttcgcgccgtgctgcgatctttc
ccagggctggaacatgccctggaggtggtgcgcgagcgtcgcggcgttcgcttcgtgaac
gactccaaaggcaccaacgtggatgcggtgctgaaggcgttggaaggaatcgaccagccc
atctggctgatcgccggcggccgcgacaagggcggcgacttttcccgcctcgaaagggcg
atacgggaacgggtgaaagggctgattctgatcggggaggccgccggccgcattcaggcg
gcgatgggtgattttgaccggtgtcgtcctgcagcgaccctccgcgacgccgtggagctt
gctgctcgcgaggcgcagcccggcgaggtggtcttactctcgccggcctgtgccagtttc
gacatgtttgcggattatcaagaccggggacggcagtttaaggccctggtgcaagggctg
ccggcgtaa
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