Nitrospira defluvii: NIDE0864
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Entry
NIDE0864 CDS
T01281
Symbol
yrbF
Name
(GenBank) ABC transporter, ATPase component, putative ATP-dependent toluene efflux transporter
KO
K02065
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
Organism
nde
Nitrospira defluvii
Pathway
nde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIDE0864 (yrbF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE0864 (yrbF)
Transporters [BR:
nde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
NIDE0864 (yrbF)
Phospholipid transporter
NIDE0864 (yrbF)
Mce system transporter
NIDE0864 (yrbF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_19
AAA_29
ATP-synt_ab
AAA_25
ATPase
AAA_22
Mg_chelatase
RsgA_GTPase
T2SSE
FtsK_SpoIIIE
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
CBK40630
UniProt:
D8PBM1
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All DBs
Position
835865..836626
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AA seq
253 aa
AA seq
DB search
MIKLVGVEKTLGGQPVLRGVDLTIPEGKLTTVIGGSGSGKSVLLKHMIGLMQPDRGEIWI
DGTDIAHLKGKALNEVRKKFAMLFQSAALFDSMTVFENVAFPLREKLRLKGEVVTRRVEE
KLGQVGLAGMGHKFPAELSGGMRKRAGLARALVMEPEIILFDEPTTGLDPLLAKSIHDLI
VAMQQQFKFTAVMVSHEIPEIFGLSDYVAMLKNGRIIEMAPSNEFVKTTDEEIREFIFVA
GTVTPKGLPTASL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgattaaactggtcggcgttgaaaagacattgggtgggcagccggtcttgcgaggggtg
gacctgacgatcccggagggaaaactcactaccgtcatcgggggaagcggctcggggaag
agcgtgctgctgaagcacatgatcggccttatgcagcctgatcggggggagatctggatc
gatgggaccgacatcgcccatctcaaggggaaggcgctcaatgaggtccgcaagaagttc
gccatgttatttcaaagcgcggcgctgttcgattcgatgacggtgtttgaaaacgtcgcc
ttccccctgcgagaaaagctccggttgaagggcgaggttgtcacccggcgggttgaggaa
aagctagggcaggtgggattggcgggcatggggcacaagttcccggccgaactgagcgga
ggcatgcgcaaacgcgccgggttggcgcgcgccttggtgatggagccggagatcattctg
ttcgacgagccgacgaccggactcgatcccttgctggccaagtctattcacgatttgatc
gtggcgatgcagcaacaatttaaattcaccgctgtcatggtcagtcatgagatccccgag
attttcgggctttccgattatgtggcgatgctcaagaacgggcggattattgaaatggcg
ccatcgaacgagtttgtgaagacgacggacgaagagattcgggagtttatttttgtcgcc
gggaccgtcacgccgaaggggttgccgaccgcatccctctga
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