Nitrospira defluvii: NIDE1009
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Entry
NIDE1009 CDS
T01281
Name
(GenBank) putative Amidase enhancer protein LytB
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
NIDE1009
Enzymes [BR:
nde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NIDE1009
Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NIDE1009
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Gene cluster
GFIT
Motif
Pfam:
SpoIID
MBG_3
Motif
Other DBs
NCBI-ProteinID:
CBK40770
UniProt:
D8PC11
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All DBs
Position
985202..986356
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AA seq
384 aa
AA seq
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MLLLSLFCAPAVLAESIRVLLAQEAPLVEVRSEGALALVTETGDTKILHAPIHLRARGDG
VHVDGQRAMGGQVLIRPLRGNLSLVIGREGGATTGAPLALSGVVRLSRKGHGLSVVNQVD
LEEYVKGVVPSEVSSAWHPEMLKVQAVAARTYALYNKMLSSARDYDVVATIQDQVYRGRT
GVDRRVEDAVESTRGIVVTHQQAPIYAAFSSTAAGPTEDAVNVWANKDLPYLKGVECPFD
LESPYYQWRASVKIDQLEHNLRHQGFSVGTIATITPIAYSRAGRVSRLRILHSGGETVLR
GEDLRKAVGYTVIPSTQFEVESIGAEVVFAGYGAGHAVGLCQWGAKELAELGYSYSSILQ
YYYPGTGLHNAALSQLMMPVIPTP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgtcgctgttttgcgcaccagccgtcttggccgaatccattcgcgtccta
ttggcccaagaggcgccgctggtggaggtgcgctcagaaggcgctctcgccctggtgacg
gagacgggcgatacgaagattttgcatgccccgatccatctcagggcccggggagacggc
gtgcatgtcgatggccagcgcgcgatgggcggacaggtcctcatccgtccgcttcgaggg
aacctctcgttggtgattggcagagaggggggcgcgaccacaggagctccgttggcgctc
agcggggttgtgcgtctgtcgcgcaaagggcatggactctcggtcgtcaatcaggtcgat
ttggaggagtatgtgaagggggtggtgccgtcggaggtcagttcggcctggcacccggaa
atgttgaaggtgcaggcggtggcggcacggacctatgcgttgtataacaagatgctcagt
tcggcacgagactatgatgtcgtcgcgaccattcaagatcaggtgtatcggggccgtaca
ggggtggaccgccgagtcgaagacgccgtcgaatcgacgcgaggcattgtcgtcacccac
caacaggcgccgatctatgccgcgttctcatccaccgcggctggcccgacggaagatgcc
gtgaatgtctgggcgaacaaagacctgccctatctcaagggggtggaatgcccattcgat
ctcgagtcgccctattatcaatggcgggccagtgtgaagatcgatcaacttgagcacaat
ctgcggcatcagggtttctctgtgggaacgattgccacgatcactccgattgcctacagc
cgggccggacgggtctcgcgcctgcggattttgcactccggcggagagacggtattgcgt
ggcgaggatcttcggaaggccgtagggtacaccgtcattcccagcacccagttcgaggtg
gaatcgatcggtgccgaggtggtgtttgccggctatggagcaggtcatgccgtggggctc
tgccaatggggcgcgaaagagttggccgagctgggctattcgtacagcagtattctgcag
tattactatcctggaaccgggttgcacaacgcggccctctcgcagttgatgatgccggtg
ataccgaccccctga
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