Nitrospira defluvii: NIDE1018
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Entry
NIDE1018 CDS
T01281
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nde03019
]
NIDE1018 (rng)
03009 Ribosome biogenesis [BR:
nde03009
]
NIDE1018 (rng)
Messenger RNA biogenesis [BR:
nde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NIDE1018 (rng)
Ribosome biogenesis [BR:
nde03009
]
Prokaryotic type
rRNA processing factors
NIDE1018 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
RimK
Motif
Other DBs
NCBI-ProteinID:
CBK40779
UniProt:
D8PC20
LinkDB
All DBs
Position
994382..995893
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AA seq
503 aa
AA seq
DB search
MGVEIAISIAREETRVAVLDNGVVTDLYGDRAKDQDFVGNIYKGRVAKVLPGMQAAFIDI
GLEKAAFMHVSDLSMDVEPGDTLVEGDDDDNKDSEVPKPKRQSSKPIEELLSEGQEVMVQ
ISKGPIGTKGSRVTTYVSLPGRYLVFMPTVEHIGVSRRIPRDEERARLKEIMKRARRPGF
GYIVRTVSEGVKEEELRSDVEFLHVLWQDVLTKRDQQPAPSLLHSDLSLSFRVVRDLFGR
RVDRLLIDSREEYNAIKGFVQRFSPEQTSRIHFYDKEESLFDYLGVEQEIARAMSRKVWL
KSGGYLVIDHTEAMTVIDVNTGRFVGKRDQEETILRNNLEAAREIAYQVKLRGIGGIIIV
DFIDMEREKNRDKVYHALVDAMSSDKARTRISRVSDLGLIEISRERVREDLLRSLSEPCH
YCDGRGYTKSPMSVAYEIFREVRRLGHEIEQQRVVVGAHPAVALLLQEQEQPGVEELERR
YSAKILVTPDDRLHLEQFDLVVM
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggagatcgcaatcagtatagctcgggaagaaacccgtgtagcggtactcgac
aacggggtcgtcaccgacctctatggcgaccgcgccaaagatcaggatttcgtcgggaat
atctacaaggggcgtgtggcgaaagtcctgcccggcatgcaggccgcgttcatcgatatc
gggttggaaaaagcggcattcatgcatgtctccgacctctcgatggatgtcgagcctggg
gataccctcgtcgagggcgacgatgacgacaacaaggactcggaggtccccaagcccaag
cggcaaagctcgaaacccattgaagagttgctgtccgaggggcaggaagtcatggtgcag
atctccaaaggtccgatcggcaccaagggatcgcgcgtgacgacctatgtgtctttgccg
ggccggtacctggtgtttatgccgacggtcgagcatatcggggtctcccgccgtattccc
cgtgatgaggagcgggcacgcctgaaagaaattatgaaacgggcgcggcgtccggggttc
ggctacatcgtgcgaaccgtcagtgaaggagtcaaggaagaggagctgcgctcggacgtc
gagttcttgcacgtcttatggcaggacgtattgacgaagcgtgaccagcagccggccccg
agcctcttgcacagcgacttgagtttgagttttcgcgtcgtgcgcgatctcttcggtcgt
cgggtggaccgcctcttgattgattcccgcgaggagtacaacgcgattaaggggttcgtc
cagcggttttcgccggagcaaacgtcgcgtattcatttctacgacaaagaagaaagcttg
ttcgattacctgggcgtggaacaggaaatcgcccgtgcgatgagccgcaaggtgtggctc
aagtccggaggatatttggtcatcgaccataccgaggctatgacggtgatcgatgtgaat
accggccggtttgtggggaagcgcgatcaggaagaaacgatcctgagaaacaacctggaa
gcggcgcgtgaaatcgcctatcaggtgaagttgcgcgggatcggcggcatcatcattgtg
gatttcatcgacatggagcgggagaaaaatcgcgacaaggtctaccatgcgctggtggac
gccatgtcgtcggataaagcccgcaccagaatttccagggtgtccgatctcgggttgatc
gaaatttcccgtgaacgggtgcgggaagatctgctgcgttcgttgtccgagccctgccac
tattgcgacggtcgcgggtacaccaagtcgccgatgtcggtggcctacgaaattttccgt
gaagtgcggcggctcggccacgagatcgagcagcaacgcgtggtcgtcggggcgcatcct
gccgtcgcgctgctcttgcaggaacaggagcaaccgggcgtcgaagaactcgaacggcgt
tatagcgcaaaaattctggtcactcccgacgatcggttgcatctggagcaattcgatctg
gtcgtgatgtaa
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