Nitrospira defluvii: NIDE1063
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Entry
NIDE1063 CDS
T01281
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nde
Nitrospira defluvii
Pathway
nde00730
Thiamine metabolism
nde01100
Metabolic pathways
nde01240
Biosynthesis of cofactors
Module
nde_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NIDE1063 (thiC)
Enzymes [BR:
nde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NIDE1063 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CBK40823
UniProt:
D8PC64
LinkDB
All DBs
Position
complement(1035531..1037447)
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AA seq
638 aa
AA seq
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MSEAHTQNGSSNGHGSKPSTARLTTTPFAASRKVHVDGALPGVRVPMREISLTPTQSANG
QGPTPNQPITIYDTSGPYTDPNVTIDVRAGLPPLRRAWIESRRDTEELPQVTSQYGRQRA
ADPKLADLRFTHIRKPLRAKSGHNVSQMHYAKKGIITPEMEFIAIRENQSRARAKELLTS
TNGHGGGVLQHPGQAWGARIPSTITPEFVRDEVARGRAIIPNNINHPETEPMIIGRNFLV
KINSNIGNSAVASSIEEEVEKMIWSIRWGADTVMDLSTGKNIHETREWIIRNSPVPIGTV
PIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRMTGIVSR
GGSIHAKWCLSHHQENFAYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDEAQFAELE
TLGELTKIAWKHDVQVMIEGPGHVPMHMIQENMEKQLKECQEAPFYTLGPLTTDIAPGYD
HITSGIGAAMIGWYGCAMLCYVTPKEHLGLPTKEDVKVGVVTYKIAAHAADLAKGHPGAQ
ARDNALSKARFEFRWEDQFNLSLDPDTARSYHDATLPDNAAKVAHFCSMCGPHFCSMKIT
QDVRDYAAQKQLEEQQAIQIGMKEKSEEFKKAGAEIYL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcccatacacagaacggttccagcaacggtcacggctccaagccctcgacc
gcacgcctcaccacgaccccttttgcggcctcgcgcaaggtgcatgttgacggcgctctc
ccgggcgtccgggtcccgatgcgcgaaatcagcctgacccccacgcagtcagccaacggc
cagggccccacgcccaaccagccgatcacgatttacgacacctccggcccttataccgat
ccgaacgtgacgatcgatgtgcgcgccggcctgccgcccttgcgccgggcctggatcgag
agtcgccgggatacggaagaacttccgcaggtcacgtcccagtacgggcgtcagcgagcc
gcggacccgaaattggccgacctccggtttacgcatattcgcaagccgctccgcgccaaa
tccggacacaacgtcagccagatgcactatgccaagaagggcatcatcacgccggaaatg
gaattcatcgcgatccgggagaatcagtcccgcgcgagggccaaggaactcctgacttcg
accaacggccacggcggcggcgtgttgcagcatcccggccaagcctggggcgcgcgtatt
ccaagcaccattacccccgaattcgtgcgcgacgaagtggcccgcggacgcgcgattatc
ccgaacaacatcaaccacccggaaaccgagccgatgatcatcggccggaacttcctcgtg
aagatcaacagcaacatcggcaactccgccgtggcttcttcgatcgaggaagaagtcgag
aagatgatctggtcgatccgctggggcgccgacaccgtgatggatctctccaccggcaag
aacatccatgagactcgcgagtggatcatccgcaattcacccgtaccgatcggtacggtg
ccgatctatcaggcgcttgaaaaggtcaacggcaaggcggaagacctgacctgggaaata
ttccgggatacgctgatcgagcaggccgagcagggcgtggattatttcaccatccatgcg
ggtgtgctcctgcgctacgtgccgatgacggccaagcgcatgaccggcatcgtctcccgc
ggcggctcgatccatgccaagtggtgcctctcgcaccatcaggaaaacttcgcgtatacg
cacttcgaagagatctgcgaaatcatgaaagcctacgatgtggccttcagcctgggcgac
ggcttacggcccggttcgatcgccgatgcgaacgacgaggcgcaatttgccgagttggag
accttgggcgaactcactaagatcgcgtggaaacatgatgtccaggtaatgatcgaaggt
cccggccatgtgccgatgcacatgattcaagagaacatggaaaagcagctgaaggaatgc
caggaggcgccgttctacacgctggggccgctcacgacggatattgcaccggggtatgac
cacatcacctccggcatcggcgcggcgatgatcggctggtacggttgcgcgatgctctgt
tacgtcacgccgaaagaacacctcggcctcccgaccaaggaagacgtgaaggtcggtgtc
gtgacgtacaagatcgccgcccatgcggcagacttggccaagggccatccgggtgcgcag
gcgcgtgacaacgccttatcgaaggcgcgcttcgagttccgctgggaagatcaattcaac
ctgtcgctggacccggataccgcccgctcgtaccacgatgcgacgctgccggacaatgcc
gcgaaggtcgcgcatttctgcagcatgtgcggaccgcatttctgttcgatgaagatcacg
caggacgtccgcgactatgccgcgcagaaacagctggaagagcagcaggccatccagatc
ggcatgaaggaaaaatcagaagagttcaagaaagccggcgccgagatctatctataa
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