Nitrospira defluvii: NIDE1108
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Entry
NIDE1108 CDS
T01281
Symbol
mutS2
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
nde
Nitrospira defluvii
Pathway
nde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIDE1108 (mutS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nde03400
]
NIDE1108 (mutS2)
DNA repair and recombination proteins [BR:
nde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIDE1108 (mutS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
ATG17_like
MSSS
MutS_III
UL16
DUF4856
Motif
Other DBs
NCBI-ProteinID:
CBK40867
UniProt:
D8PCA8
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Position
1078352..1080784
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AA seq
810 aa
AA seq
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MQSETLQSESCNVLEWATLLDHLASYAQSAIGTERCRSLVLEINLSQAQMRQQETSDMLR
LRSGADPFPVLRFPNVAEWLGRVAKGACLEVHELRDIALVLGLIDDVQRYLLRHQADAPA
VCAMAVQLGPIEEYRRLTIALNAAIDPDGSMRESASPELHRLMHRAKDLKQQMRHRLDQI
LHSRRYEEVLQEHYFAQREGRYVVPIKAEMQGRIPGIVHDISSSGATVFLEPRELVDLNN
SIKVVDLDIEREVRRILRELSAMVAPHQPALAGSVAVLGELDAISAKAGLSQRLQAAPPR
LNEQGRILLNRARHPFLVLTKEQVVPNDLVFDETVRVLIISGPNTGGKTVTLKLLGLFAL
MVRCGLHLPCAPESEMAIFPSVYADIGDAQDLARDLSSFSAHITQMVQLLKEVSEGTDPG
TSPSPIHPGRALVLLDEPVTSTDPAEGAALASALLCRLAAAGVKVVATTHYSLLKGLAQE
TSGFANASVEFNIDTLSPTYRLIQGQPGGSAAIEIAGRLGMDESLLQDARARLQGDNRLL
ETLLNDLQDKQRRMSEDQAAATLARQTAEQAARESQELLTYLQESERDERQGLKKKLSQE
FQRARAAVQATLDDLKRDQKLLKAKETKVRLIELEQAAGREVGAAQEPIPVDRLSVGAAV
EVVGLGMTGTLLESPQGKKRVRLKVGEGEILANVGSLVGLARLPQPARSEPRKTTAVTYR
RTSQTLAPEDIQETLDVRGQAADDALDIVVAGLDRAILGGSPFVRIIHGHGTGRLRVVLR
DYLKASPYVVSFRPGDRAEGGDGVTIVELR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgaaaccttacagtccgaatcgtgcaacgtgctggaatgggccacgctgctg
gatcacctggcctcctatgcccagtctgcaatcgggacagagcgatgtcgatcgctggtt
ctggaaatcaacctgtcgcaagctcaaatgcgccagcaggaaacgtcggacatgcttcga
ttgaggtccggggccgatccctttccggtcctacgatttcccaatgtggcggagtggtta
ggccgggtcgccaagggtgcctgtcttgaggtgcacgagttgagggacattgcgttggtc
ttgggattgatcgatgacgtgcagcggtatctcctgcgtcatcaggccgatgccccggcc
gtgtgtgcgatggcggtgcagcttggaccgatcgaggaatatcgccggctgaccattgcg
ttaaatgccgccatcgatcccgacggatcgatgagggaatcagccagccccgaactgcac
aggttgatgcaccgcgccaaggacctcaagcagcagatgcggcatcgcctcgaccagatt
ctgcactcgcgccggtatgaggaggtgctgcaggaacactattttgcgcaacgggaaggg
cggtacgtggtcccgattaaggccgagatgcaggggcgaattcccggcattgtgcatgac
atctcgtcgagtggagccactgtgtttctggagcctcgcgagctggtggatctcaataac
tccatcaaagtggtggatttggacattgagcgtgaggtacggagaattctgcgggaactg
tcggcgatggtggcgcctcatcagccggcgcttgccggcagtgtggcggtgctgggcgag
cttgatgccatttccgcgaaggccgggctgagccagcggctgcaggccgctccgccgcgt
ctcaatgagcaggggcgtatcctgctcaaccgcgcacggcacccgttcctggtcctgacc
aaggaacaggtggtgccgaatgacctggtgttcgatgaaaccgtgcgagtcctcatcatt
tccggacccaacacgggcggaaaaaccgtcacgctgaaactgctgggattgttcgcattg
atggtgcgctgcggtctgcatcttccctgtgcgcccgagtcggagatggcgattttccct
tcagtctatgcggatatcggcgatgcgcaggatctggcgcgggatctgtccagtttttcg
gcccacatcacgcagatggtgcaattgctgaaggaggtgtccgaagggaccgaccccggc
acttcgccctcgccgatacacccaggacgggcattggtattgcttgatgagccggtcacg
tccacggatccggctgaaggcgcggcattggcgagcgctctgctgtgccggttggcggca
gcgggtgtgaaggtggtcgccaccacgcactacagcctgttgaaagggttggcgcaagag
acgtcgggcttcgccaatgcgagtgtggagttcaacatcgacaccctctccccgacctat
cggctgatccaggggcagccgggagggtcggcggctatcgaaattgccgggcgtctcggc
atggatgagtcgttgctgcaggatgcccgtgcccggctgcaaggcgataatcggctactg
gagaccttgctgaatgatttacaggacaaacagcggcgtatgagcgaggaccaggctgca
gcaacgctcgccaggcagactgccgagcaggcggcccgcgaatcgcaagagcttctgacc
tacctgcaggaatcggaacgggacgagcgacagggactgaagaaaaagctctcccaggag
tttcagcgtgcccgggcggcggtccaagcgacgctcgacgacctgaagcgcgatcaaaag
ttgctcaaggccaaggaaaccaaagtccgactcatcgaactggagcaagccgccggccgt
gaagtgggggcggcgcaggagccgattcctgtggatcggctgtcggtgggggctgcggtg
gaggtggtcgggttaggcatgacgggaaccttgctcgaaagcccgcaggggaaaaaacgt
gtgcgcctcaaagtcggagaaggcgaaattttagcgaacgtgggaagtctggtcggcctc
gcacgactgcctcagcccgctcggagcgagcctcgtaagacgacggcggtgacgtaccgg
cgaaccagtcagaccctggcccccgaggatatccaggagacgttggatgtgcgaggccag
gccgcggacgacgcactggatatcgtggtggccgggctcgatcgggccattttgggcggg
agcccgtttgtgcgcatcattcatgggcacgggaccggccgactgagggttgttctacga
gactacttgaaggcgtctccctacgtcgtgagttttcgaccgggtgatcgcgcggaggga
ggcgatggtgtcaccattgtcgagttgcgatga
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