Nitrospira defluvii: NIDE1205
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Entry
NIDE1205 CDS
T01281
Symbol
pycA
Name
(GenBank) Pyruvate carboxylase, subunit A
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
nde
Nitrospira defluvii
Pathway
nde00020
Citrate cycle (TCA cycle)
nde00620
Pyruvate metabolism
nde00720
Other carbon fixation pathways
nde01100
Metabolic pathways
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
nde01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NIDE1205 (pycA)
00620 Pyruvate metabolism
NIDE1205 (pycA)
09102 Energy metabolism
00720 Other carbon fixation pathways
NIDE1205 (pycA)
Enzymes [BR:
nde01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
NIDE1205 (pycA)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
RimK
ATPgrasp_ST
ATP-grasp_4
GARS_A
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
CBK40962
UniProt:
D8PCK3
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All DBs
Position
complement(1176781..1178199)
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AA seq
472 aa
AA seq
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MFRKILIANRGEIAMRIIRGCRELNIATAAIYSEADSSGIYVKKADESYLVGPGPVKGFL
DGKQIVEIAKRIGADAIHPGYGFLSENTKFARLCQTSGITFIGPSPETIDLMGSKVKARQ
IAQQAGVPIVPGTEGGVTSVDDALAFAHQINYPVMIKASAGGGGRGLRVVRSDQELRENI
DVASREAQAAFGDGSIFIEKYIERPHHIEFQILGDKHGNIIHLGERDCSIQRRHQKLIEI
APSLILTPKLRAQMGEAAIAIAKAVHYDNAGTVEFLLDHEGHFYFMEMNPRLQVEHTVTE
QITAIDIVRNQISIAAGKPLEIRQKDVTLQGHAIQCRINAEDPRNNFMPCTGTITAYLSP
GGIGVRIDGAVYRDYTIPPYYDALLAKLTVRGRTWEETVSRMRRSLEEYVLRGVKTTIPF
MKNVMMEQDFQAGRFDTSYLETHPDLYQYEESEEPEDLVLAISAAIAAYEGL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggaagatccttattgccaaccgtggcgaaatcgccatgcgcatcatccgtggc
tgtcgtgagctcaatatcgcgacagcggcgatctattctgaagccgactcttcaggaatc
tacgtcaaaaaagccgacgagtcctacctcgtaggcccgggacccgtcaaggggttcctg
gacggaaaacagatcgtggagatcgccaagcgcatcggcgccgacgcgattcatcccgga
tacgggttcctctctgaaaacactaaattcgcccggctctgccaaacctcaggcattacc
ttcatcggtccgtcccccgagacgatcgacctcatgggcagcaaagtgaaggcgcgacag
atcgcccagcaggcgggggtcccgatcgtccccggcaccgaaggcggagtcaccagcgtc
gacgacgccctggccttcgcccatcagatcaactaccccgtcatgatcaaggccagcgcc
ggcggcgggggccgaggattgcgggtcgtccggtccgatcaggaattgcgagagaacatc
gatgtcgcgtcgcgagaagcacaggccgcgttcggcgacggcagcatcttcatcgagaaa
tacatcgaacgaccgcaccatatcgaatttcaaatcctgggcgacaaacacggcaacatc
atccacctgggtgagcgggattgttccattcaacggcggcaccagaaactgatcgaaatc
gccccctcattgatcctgacgcccaaactgcgcgcccaaatgggcgaggccgccattgcc
atcgcgaaagcggtgcactacgacaatgccggcaccgtcgagttcctcctcgaccacgag
ggccatttctacttcatggaaatgaatccccgcctccaggtggaacataccgtcacggaa
cagatcacggccatcgatatcgtccgcaatcaaatttccattgcggcgggaaagcctctg
gagatccggcagaaggacgtaacgttgcagggccatgcgattcagtgccgcatcaatgcc
gaagacccgcgcaacaacttcatgccctgcacaggcaccatcaccgcctatctgtcaccc
ggcggaatcggagtccgcatcgacggcgcggtctatcgcgattacacgattcctccctat
tatgatgcgctgttggcaaaactgaccgtccgcgggcgcacctgggaagagaccgtgagc
cgcatgcggcgttcccttgaagagtatgtgctgcgcggggtgaaaacgaccattccgttc
atgaagaacgtgatgatggaacaggattttcaagccggacgattcgatacgtcctacctg
gaaacccatccggacctgtatcaatacgaagaatccgaggagcctgaggacctggtgctg
gccatctccgcagcgatcgccgcgtacgaaggactctga
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