KEGG   Nitrospira defluvii: NIDE1223
Entry
NIDE1223          CDS       T01281                                 
Name
(GenBank) Sigma-54 dependent DNA-binding response regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
nde  Nitrospira defluvii
Pathway
nde02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nde00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NIDE1223
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nde02022]
    NIDE1223
Two-component system [BR:nde02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   NIDE1223
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 AAA_5 HTH_8 AAA Mg_chelatase AAA_3 MCM AAA_16 AAA_19
Other DBs
NCBI-ProteinID: CBK40979
UniProt: D8PCM0
LinkDB
Position
1192950..1194350
AA seq 466 aa
MSASILIVDDEVSILNSLSSILEDEGYEVSVAKSGIEALKLCAVSPPELMMLDIWMPDMD
GLETLRRLRELVPQTQVMMMSGHGSIETAVKAIKLGAYDYIEKPLSLENVTLRVKHALDQ
HRLEQENRTLRTKVERKFELIGQSPAMRQLKQIIETAGPTNSRVLIGGENGTGKELVARA
IHQHSARATRPFVAVNCAAIPETLIESELFGHERGSFSGATTMKRGQFEQADGGTLFLDE
IADMSLSTQAKVLRALQEQQFTRVGGTKLIKVDVRVLAASNKDLLKEIEKGTFREDLFYR
LNVVPIVVPTLRDRREDIPLLVKHFLHVHAEEQGLKIKQVSPEAMEVFIQYEWPGNIREL
RNLIERLMIMVPGPVIEASHASVALQVRPQLSATQQAAGAQVPHSLLTRHYDSLRDARNA
FEKEFIARKLREHHWNISRTAEDLQIERSHLHRKIKLLDVEMRPES
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtctgcttcgattctgattgtcgatgatgaagtctccatcctgaactccttgagcagc
atcctggaggatgaaggatatgaggtcagcgtggccaagagcggcatcgaggcgctcaaa
ttatgtgccgtgagtcctcccgaactgatgatgctggatatctggatgcccgacatggat
gggttggagacgctccggcgcttgcgcgagctggtgccgcagacgcaggtcatgatgatg
tccgggcacgggtcgatcgagacggcggtgaaagccatcaagcttggcgcttacgattat
attgagaagccgctctcgctcgaaaacgtcacgctacgggtcaaacatgcgttggatcaa
caccggctcgaacaggagaatcggacgctccggacgaaggtggagcggaagttcgaactg
atcgggcaatcgccggcgatgcggcagctcaagcagattatcgaaacagcggggccgacg
aacagccgggtcttgatcggcggcgagaacggtacgggcaaagagctcgttgccagagcc
atccatcagcacagcgccagggcaacccgcccgtttgtggcggtgaactgtgccgccatt
cctgaaacgttgatcgagagcgaattgttcgggcacgaacgcgggtctttcagcggggcc
acgacgatgaagcggggccagttcgaacaggccgacggcgggacgctgttcctggatgaa
attgcggacatgagcctgagcacccaggccaaggtcctgcgggcgcttcaagagcagcag
tttacgcgggtcggcgggaccaaactcatcaaggtcgatgtgcgggtcctggcggcctcg
aacaaggatctgttgaaggaaatcgagaaggggacgttccgggaagacttattttaccgc
ctcaatgtggttccgatcgtggtgccgaccttgcgggaccgccgtgaggacattccattg
ctggtgaaacattttctccatgtgcatgccgaggagcagggcttgaagatcaagcaagtc
tcgccggaagccatggaggtgttcatccagtatgaatggccgggcaacattcgcgaactg
cgcaacctgatcgagcggctcatgatcatggtgccgggaccggtcattgaggcctcgcat
gcgtcggtggcgttgcaggtgcgtcctcagctgtccgctacgcaacaggctgccggggcg
caggtgccccattccctcttgacgaggcactacgactcgcttcgcgatgcccgcaatgcg
ttcgagaaggagtttatcgcccgcaagctgcgtgaacatcattggaacatctcgcgcacg
gccgaagacttgcagatcgagcgcagccacttgcatcgcaagattaagttgctcgatgtg
gagatgcgccccgagagctag

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