Nitrospira defluvii: NIDE1256
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Entry
NIDE1256 CDS
T01281
Name
(GenBank) Sigma-54 dependent DNA-binding response regulator
Organism
nde
Nitrospira defluvii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_29
Mg_chelatase
AAA_3
AAA_16
MCM
HTH_17
HTH_23
Xre-like-HTH
AAA_2
nSTAND3
NAD_binding_3
TIP49
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
CBK41012
UniProt:
D8PCQ3
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All DBs
Position
1221017..1222411
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AA seq
464 aa
AA seq
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MSQAKLFVVDDDEAARTLLAEALAKEGYEVEAFSSGQAAVERGKQSRADVVLTDIRMEQG
DGFLVLKEFKKFSPDTSIVLLTAFGSLEGAIEAIKQGAYDYLAKPFKRDEIRLVVQRSLE
HCRLVRENARFREDARAREPWSQLVGSSPAMLEVYKLVARVSEGRSTVLIEGESGTGKEL
IARAVHLNSLRRDKPFIPVNCGALPDHLLESEMFGYEKGAFTGAVGAKAGLFEAADGGTL
FLDEIGDLGQALQVKLLRVMQEHEVRRVGSTASVKVDVRIIAATNRDLATLVKEGKFRDD
LYYRLNVVRIVLPSLAERREDITMLAHHFLQKYAKQSLHVRGFLPETMALLKRYHWPGNV
RELENAVERAVSLSHGPLLLPEDLPESIRVEPDSGELLKGPPAEGDQDALLTLDEVEKRH
LARVLKETRGNKVKAAKILGIDRRTLYRMAERFGLDFGDEAEEK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggcgaagttattcgtagtggatgacgacgaggccgctcgaaccttgctggcg
gaagcgctggcgaaggaggggtatgaggttgaggccttttccagcggccaggcagcggtg
gaacgcggcaaacaatcgcgggccgatgtcgtcctgaccgacatccggatggagcaaggc
gacggatttcttgtgttgaaggagttcaagaagttcagtccggacacctcgatcgtcttg
ttgaccgcgttcggatctctggagggtgcgatcgaggcgatcaagcaaggagcctacgac
tacctggccaagccgtttaagagggacgagatccgtctcgtcgtccagcgcagtctggag
cattgtcgcctggtgcgggaaaacgcccgctttcgcgaagatgcgcgcgcacgcgaaccc
tggtcacagttggtgggcagcagccctgcgatgctggaggtgtacaagctggtggcccgt
gtttccgaggggcgcagcacggtgctcatcgaaggagaaagtggaacagggaaagaactg
attgcgcgagctgtccatttgaacagtctgcgtcgcgacaaaccgttcattccagtcaat
tgcggcgccttgcccgatcatctcctggagtcggaaatgttcgggtatgagaagggcgcg
tttacgggcgccgtcggagccaaagccgggctgttcgaggccgccgatggcggtacgctg
tttctcgatgagatcggcgatctcggccaggcgcttcaggtcaagctcctgcgggtgatg
caagagcacgaggtgcggcgtgtcggcagcacggcatcggtgaaagtcgatgtgcgcatc
attgccgcgaccaatcgggatttggccacgctcgtgaaggaaggcaagtttcgcgacgac
ttgtactatcgtctgaacgtggtgcggattgtcctgccgtctctggctgagcggcgtgag
gacattacgatgctcgcgcatcactttctgcaaaaatacgccaagcagtcgttgcatgtg
agagggtttttaccggaaacgatggcgctgttgaagcgctatcattggccggggaatgtg
cgtgaactggagaatgcggtggaacgggcggtctcgctcagccatggcccgctgttgctt
cccgaagatctccccgagtcgatcagggttgagccggattcaggtgagctgctcaagggg
ccacccgccgagggggatcaagacgcgctgttgaccttagacgaggtcgagaaacggcat
ctggctcgggtgcttaaggagacgcgaggcaacaaggtcaaggcggcgaagattctgggg
atcgatcggcgaacgttatatcgaatggcggagcgattcggattggatttcggcgatgag
gccgaggagaagtaa
DBGET
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