Nitrospira defluvii: NIDE1338
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Entry
NIDE1338 CDS
T01281
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
nde
Nitrospira defluvii
Pathway
nde03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NIDE1338 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nde03011
]
NIDE1338 (rpsD)
Ribosome [BR:
nde03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NIDE1338 (rpsD)
Bacteria
NIDE1338 (rpsD)
Archaea
NIDE1338 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
Gemini_AL3
FhuF
Motif
Other DBs
NCBI-ProteinID:
CBK41088
UniProt:
D8PCX9
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All DBs
Position
1283407..1284033
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AA seq
208 aa
AA seq
DB search
MAKYSGPVCRLCRREGEKLFLKGSRCMTEKCAIERRSYPPGQHGQARQRTSDYSLQLREK
QKLKRIYGLQECQFRGIFERAERQAGVTGDTLLRLLECRLDNVVYRLGFGASRKEARQLV
NHGHMMINGRKVKAPGALVKAGDSVEVRQKSRELLPIQGALAAVDGRGIPEWLELDRTAC
KGTIRSLPTKEHIVLPVNEQMVVELYSR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaatatagtggacctgtctgccgcttgtgtcggagagagggcgagaagctcttt
ttaaaagggtctcgttgcatgaccgagaagtgcgcgattgagcgccggagttatccccct
gggcagcatggtcaagctcgtcagcggacgtcggattatagcctgcagttgcgcgaaaaa
cagaagctcaagaggatttacggactgcaagagtgtcaattccgtggcatttttgaacgg
gccgaacggcaagccggcgtcactggcgatacgttgctgcgcctcctggaatgccgcttg
gacaatgtggtgtatcggctcggctttggagcctctcggaaagaggcccggcagttggtc
aatcatggtcacatgatgatcaacggtcgtaaagtgaaggcgcccggtgctcttgtcaaa
gcgggggattccgtggaagtccgacagaagagccgtgaacttctccccattcaaggcgca
ctggcggcagtggatggacggggtattccggagtggcttgaattggaccgaacagcctgc
aagggcaccattcgttcgttgccgaccaaggagcacatcgtgctccctgtcaacgaacag
atggtcgtggaattgtactcgcgctaa
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