KEGG   Nitrospira defluvii: NIDE1346
Entry
NIDE1346          CDS       T01281                                 
Symbol
yhbJ
Name
(GenBank) conserved exported protein of unknown function UPF0042, predicted P-loop containing ATPase
  KO
K06958  RNase adapter protein RapZ
Organism
nde  Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:nde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nde03019]
    NIDE1346 (yhbJ)
Messenger RNA biogenesis [BR:nde03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     NIDE1346 (yhbJ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_33 AAA_16 COMP
Other DBs
NCBI-ProteinID: CBK41096
UniProt: D8PCY7
LinkDB
Position
1289868..1290749
AA seq 293 aa
MLALLMAALNLVVISGLSGSGKSHALKAFEDAGYFCVDNLPPALLPTFVELCHQQGGEIK
NVALGIDIRERVFFGDLAKVLGELKAQGHALQLVFLEAREEVLVRRFSESRRPHPLLPHM
PVVEGVRFERERLSELRKHADRVIDTSNITVHELRELLIRQFRQETAARRMTISLVTFGY
KFGVPYDIDLLFDVRFIRNPFFVPELKALTGEDARVQQYVLGDPAAGQFLEHLQGLFGFL
IPLYERDQRSYLSIGIGCTGGRHRSVTMALHLREQFAALGYDVSVTHRDMQKP
NT seq 882 nt   +upstreamnt  +downstreamnt
gtgctcgcactgctcatggccgcgcttaatctcgtcgtaatcagcggcctttccggctcc
ggaaagagccatgccttgaaagccttcgaagacgcgggatatttctgcgtcgacaatctt
cctccggcccttcttcccacctttgtcgagttatgccaccagcagggcggggaaattaag
aatgtcgccctgggcatcgatattcgcgagcgagtctttttcggggatttggcaaaggtc
ctgggcgagctaaaagcgcagggccacgcgctgcaactcgtgtttctggaagcccgagag
gaagtgctggttcgccggttttccgagagccgccgtccgcatcccttgttgccgcacatg
ccggtcgtggaaggcgtgcggttcgagcgtgagcgcctcagcgaactgcggaagcatgcc
gaccgggttatcgacacctccaacattacggtgcatgaattgcgcgagttgctgatccgg
cagttccgccaggaaacggccgcccgccgcatgaccatctcgctggtcacattcgggtac
aagttcggcgtgccctatgacatcgacctgctcttcgacgtgcgtttcattcgcaatccg
ttcttcgtgcccgagctcaaagcattgaccggggaggatgcccgcgtgcagcagtatgta
ttgggagatcccgcggccggtcaatttctcgaacatctgcaaggcttgttcggctttctg
atcccgctctatgagcgggatcagcgaagctacctcagcatcggcatcggttgtaccgga
gggcgtcatcggtccgtgaccatggcgttgcatctccgggaacaatttgccgccctcggt
tatgatgtgtccgtcacccaccgcgacatgcaaaaaccctag

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