Nitrospira defluvii: NIDE1423
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Entry
NIDE1423 CDS
T01281
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridylate synthase B (modular protein)
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nde03009
]
NIDE1423 (rluB)
Enzymes [BR:
nde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NIDE1423 (rluB)
Ribosome biogenesis [BR:
nde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIDE1423 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
CBK41172
UniProt:
B3U4L2
LinkDB
All DBs
Position
1367506..1368768
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AA seq
420 aa
AA seq
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MDVRLQKLIAGTGLASRRKAEELITSGRVTINGSVVKELGTKVDPARDHVKVDGKHLRAA
QPYVYLILNKPKNVMSTLDDPEGRPTVKDLLHGVTVRVFPVGRLDFDSEGLMLLTNHGDL
AQALLHPRYHVPKTYLIKVKGVLDDAKIEALERGVKLEDGFTAPAKVKKVSRAESNSWLE
VTIHEGRKHQVKRMVEAVGHSVIKLVRVRMGPLLLGDLAPREYRFLTDREANRLRELVED
RVARAERPELDASGKPTRWMPPTEPAPPRPPKPERSGRGPKSQRSERGPRSQRSLAGSKP
SRSGRGNTRRPMSPGAKFRRPAKGVGFQRTQAGPIPQGADRGPGSRPTGSDQKIQRTQPG
GGFQRPRASAKPQGPGRGTTVRRSSPGQNFQQNRRGGSSASRPGQRGPAGKSRPSTRRRA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcagactacaaaagctcatcgccggcaccggactggcttcgcggcgcaaggcc
gaggagttgatcacgtccgggcgtgtgacgatcaatggtagcgtggtaaaggaactcggc
accaaagtcgatcccgctcgcgaccatgtcaaagtcgatgggaaacatcttcgggccgcg
cagccctatgtgtatttgatcctcaacaagcccaagaacgtcatgtccacgctggatgat
cctgagggacgtcccacggtcaaggacctcctgcacggagttaccgtgcgcgtgtttcct
gtcggccgcctggatttcgacagcgaagggctcatgttgctgacgaatcacggcgatctg
gcccaggccctgctccatccgcgctaccatgtcccgaaaacctatttgatcaaggtcaag
ggcgtgctcgacgatgcgaaaatcgaagcccttgaacgaggcgtcaagctggaagatggc
ttcacggcgccggcgaaggtgaagaaggtcagccgggcggaaagcaactcatggcttgag
gtcacgattcacgaaggacggaaacatcaagtgaagcggatggtcgaggcggtgggccat
tcggtgattaagctcgtgcgtgtccgcatgggaccgttgcttttgggagatttggcaccg
cgggaatatcgattcctgaccgaccgcgaggcgaatcggctacgggaactggtggaggat
cgggtggccagagcggaacgtccggaattggatgcgtccggaaagccgactcgctggatg
cccccgacggaaccggctccgcctcgccctcccaagccagaacgttcagggcgtgggcca
aaatcccagcgttctgaacgtgggccgcgttcgcagcggtccctggccggttcgaaacct
tcacgctcaggtcgtggaaacactcggcggcccatgagtcccggtgccaaatttcgtcgt
cctgccaaaggggttggctttcaacggactcaggctggtccgatcccgcagggggctgat
cgtggccctggctcacgtccgaccgggtccgaccaaaaaatccagcgcactcaacctgga
gggggatttcaacggcctcgtgccagcgcgaaaccccaaggccccggtcgtggcacaacg
gttcggcgctcgagtcccggccagaattttcaacagaaccggcgtggcggatcatcagct
tcgcgcccgggacaacgaggccctgctggaaaatcgcggccctcaacgcggagaagagca
tga
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