Nitrospira defluvii: NIDE1425
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Entry
NIDE1425 CDS
T01281
Symbol
aspS
Name
(GenBank) Aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
nde
Nitrospira defluvii
Pathway
nde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NIDE1425 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nde01007
]
NIDE1425 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE1425 (aspS)
03029 Mitochondrial biogenesis [BR:
nde03029
]
NIDE1425 (aspS)
Enzymes [BR:
nde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NIDE1425 (aspS)
Amino acid related enzymes [BR:
nde01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NIDE1425 (aspS)
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NIDE1425 (aspS)
Prokaryotic type
Other AARSs
NIDE1425 (aspS)
Mitochondrial biogenesis [BR:
nde03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NIDE1425 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CBK41174
UniProt:
B3U4L4
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All DBs
Position
1368765..1370528
Genome browser
AA seq
587 aa
AA seq
DB search
MKIRTHRCGELTKAQVGQQVVLNGWVQRRRDHGMVLFIDLRDRTGLTQVVFNAERNAAVH
EAAHTLRSECVVSVTGQVMARPDESKNPNLPTGEIEVFADAVEILNEAKTPPFMIEDDIE
ITESLRLKYRYLDLRRPRMQRLLGLRHGIMQAVRTFLNAEQFLEVETPVLTKSTPEGARD
YLVPSRVNPGMFYALPQSPQLFKQVLMVSGVDRYYQIARCFRDEDLRNDRQPEFTQIDLE
MSFVDREQVMSLMERMIVSVFKDAGGVQLPTPFPRMTYADAMGRYGSDKPDLRFDLPLHD
VTAFAAKSDFKVFKEAATKGGLVKALVVSGGASIARSRIDALGETAKSFGAKGLAWLKIT
ADGQLESVIAKFLDAKAFAEALPEAKPGDLVLFGADKPAIVHDVLGRIRLLLGEELNLID
KTAWKPLWVTEFPLLDYSPEEKRYIFMHNPFAAPMDEDLPFLDTEPLRARAKAYDMVLNG
SEIGGGSIRNHRSDIQFRILDLLGIGKEQAQAKFGFLLEALEYGAPPHGGIAFGLDRLIM
LLGGADSIRDVIAFPKTQRAQCPLTEAPSGVSADQLKELRIKLDLVE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaggacccatcggtgtggggaattgaccaaggcccaagtcggtcagcaggtg
gtattgaacggatgggtgcaacgtcgccgggatcacggcatggtgttgttcatcgatctg
cgtgatcgaacagggttgacgcaagtggtcttcaacgccgagcggaatgcggcggttcac
gaggcggcgcataccttgcggagcgaatgcgttgtgtcggtgactggccaggtgatggcc
aggccggatgagtcgaagaatccgaacctccccaccggtgagatcgaagtgttcgcggat
gccgtcgagattcttaacgaagccaagacgccgccctttatgatcgaagacgatatcgag
attaccgagtctcttcgattgaagtaccgctatcttgatctcagacgaccgaggatgcag
cggttgctgggattgcgtcacgggatcatgcaggcggtgcggaccttcctgaacgcggaa
cagtttcttgaagtggaaacgcccgtgttgaccaagagcacgccggaaggcgctcgtgac
tatctcgtgccgagccgtgtgaatccgggcatgttctatgcgctgccccagtcgccgcag
ctgttcaagcaggtgttgatggtgagcggcgtcgatcggtattaccagatcgcccgctgc
tttcgcgatgaagacctccgcaacgaccgccagcctgagtttacccagatcgatctcgaa
atgtcgttcgtggatcgtgagcaggttatgtcgctcatggagcgcatgatcgtctccgtc
ttcaaggatgccggcggggtacagttgcctacgccctttccccggatgacctatgccgac
gccatggggcgctacggttcggacaagccggacctacgctttgacctgccgttgcatgat
gtcacagcgtttgccgcgaagagcgacttcaaagtgttcaaagaggcggcgaccaagggg
ggactggtcaaggcgctggtcgtgtctggcggagcctccattgcgcggagtcgtatcgac
gcgctcggtgaaacggcgaaaagttttggggctaaagggttggcctggttgaaaatcact
gcggatggccagttggaatcggtgattgcgaaatttctcgatgccaaggcctttgccgag
gccttgccggaagcgaagcccggcgatctggtgcttttcggcgcggacaagcctgccatc
gtgcatgatgtcttgggccggatacgcctgttgctcggtgaggaactcaatctcatcgac
aagacggcctggaagcccctatgggtgacggagtttcccttgctggactattcgccggaa
gagaaacgctacatcttcatgcacaacccgtttgccgcgccgatggatgaagacctgccc
ttcctcgatacggagcctctacgggccagagcgaaggcctacgatatggtgctgaacgga
agcgaaatcggcggcggcagcattcgcaatcatcgcagcgacatccagtttcggattctg
gatctgttggggatcggcaaggaacaggcgcaggccaagttcggtttcttgctcgaagcg
ctggagtatggcgcgcctccgcacggcggtattgccttcggtctcgaccggttgatcatg
ctgctgggcggagccgattcgattcgcgatgtcatcgcgttccccaagacgcaacgcgcg
caatgcccgcttacggaggccccctcaggcgtgagtgccgatcagttgaaggaactgcgc
attaagctggatctcgtcgagtag
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