Nitrospira defluvii: NIDE1448
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Entry
NIDE1448 CDS
T01281
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nde
Nitrospira defluvii
Pathway
nde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIDE1448 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nde03400
]
NIDE1448 (ung)
Enzymes [BR:
nde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NIDE1448 (ung)
DNA repair and recombination proteins [BR:
nde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIDE1448 (ung)
Prokaryotic type
NIDE1448 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBK41191
UniProt:
B3U4N1
LinkDB
All DBs
Position
1390198..1390878
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AA seq
226 aa
AA seq
DB search
MLPPFPTGWKQLFTKQVNSQRYRALELFLEQEAAAGQAILPPSQEIYAALETTPYEQVKV
LLLGQDPYHTPGMAHGLCFSVRPYVAPLPRSLGNIYRELRDDVGCSVPNHGCLEPWARQG
VLMLNSVLTVRAHAANSHRGRGWEAVTDRIIAVLNAKPSRVVFVLWGVEAKKKQALITAA
QHVVISCAHPSPLSARKFFGSRCFSQVNRALTEANLKPIDWQIPDL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaccatttccaacaggctggaagcagttgttcacgaagcaggtgaatagccag
cgctatcgagcgctcgagctgtttctcgaacaggaagcggcggcaggccaagcaatcttg
cccccgtcccaggagatttatgctgccctggagacaacgccctacgaacaggtcaaggtt
ctactacttggccaggatccctaccatacccctggaatggcccacggactgtgtttttcg
gtacggccttacgtggcgccactaccccgctcgctgggaaatatctatcgggaacttcgg
gacgatgtcggttgctctgtgccaaaccacggctgcctggagccctgggccaggcaggga
gtgctgatgctgaattccgttctgacggttcgggcgcatgcagccaattcacaccgtggg
cgtggctgggaagcggtcactgatcgtatcattgccgtcctaaatgcaaagccgagtcgt
gtcgtattcgtactctggggcgtggaggcgaagaaaaagcaggcactgatcacagctgcg
caacatgtggtgatttcctgcgcccacccctcacccttgtccgcgagaaagttcttcgga
tcacggtgtttctcgcaggtcaatcgagccctcactgaggcgaatcttaaaccgatcgat
tggcaaattcctgatctctga
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