Nitrospira defluvii: NIDE1907
Help
Entry
NIDE1907 CDS
T01281
Name
(GenBank) conserved protein of unknown function, putative DNA repair exonuclease SbcCD, subunit C
Organism
nde
Nitrospira defluvii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Phe_hydrox_dim
Motif
Other DBs
NCBI-ProteinID:
CBK41633
UniProt:
D8PEH4
LinkDB
All DBs
Position
1801782..1805312
Genome browser
AA seq
1176 aa
AA seq
DB search
MKLARLLLFAFGPFTNKTLDFSVGSSSLHVIYGPNEAGKSSALRAMTDLRFGIPLRSPDD
FVHPAGDLRIGGVFIDQTGRPVGLIRRKGRGTTLSGLDVRTEQTDPGFTVDSGLERELTG
GLDRQEFEAMFGLNHARLREGGAVLLNGEGDLGSALFEASAGTSGIAALLAALDTDAKKL
YSQHGRAQNAVINEARRQLDEQRKAWREAQTKPAEWQELNRAHDTAKTALDDLTKALEAL
RRRENELTELRTVEPLLREHDRLASALQSYATVPDLSAQQREERLAAEQALQRAQIDLRE
SEEELARCAAALDGLVIEPLLLDHADAIERLVSGVEAAARNRHDVHQQNGLIAKIEGELD
LDVARLAPGVNRRTILEAVPSSADRVALEGHLAEVSRLGERLEGYRERAEALDAALQPAS
VLPDTVPDPLHRQAFTAAIRAGQAQGDVVRQKSEADRRLRELEGQLALALSELGLESEQA
LRRSQPVLEAQIAQAKQDLTEIEAQLTKWRDESERVGRDLDGQQLRQRQLAAEGEVVTAE
TLRQARAKRSEEWTAIRRTYIDETSGTDQLALGFDAAKALPETFESAVGEADRQADLLRA
DTKRAAGLEECSARIEQMELRRKELAGEMAARRADRDGVQAAWRQRLVQAGLPDLDPETL
REWQGRRHEALQLVERVTALRVDRDRVLADAGRAAAAIAGELRAVGHALATTPAEEAEQL
SALIDQAVRWEQSATAAEAEQQARLKTAHNQRIEREKVGRQVSETEAEHRRHLDALQAWH
TRLFLAGDAPPEALKSRLDELDGLARQASALADAQQRKAQLQAVVDDLLTQAAQVAELLG
EAVPTMLDDCADRLRKRLGVSRQHQQEGHALIRDRTKAQEKKRQAAAVQVTEAAVLAGLC
TRAGGATIEQLPELEEQAAKKRELRKSLALLRQQLAHASPQSEAELRARLTGLDVPALES
ERERCRTERVRLEQEQTSVQRTEEQARRALEVIDASDRAALAREAMESAAARYRSAIRPW
ARLKLARALLQEALNRFRERAQAPMVSAASAYFSLMTGGAYERLVTDEREDRPVLCAQRA
GGVTIGIEAMSEGTADQLYLALRLAALELRRPSHPPMPLVLDDTLITSDDARAANILRAL
ARFAEGSQVMLFTHHRHLLDVARSTLGDTAVMTHRL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcgcgcctgttgctgttcgccttcggtccctttaccaacaagacgttggac
ttttccgtcggctcaagcagtttacatgtgatttatggacccaacgaagcaggtaaatcg
tcggccttgcgggccatgacggatttgcggttcggcattccgctacgcagcccggacgat
ttcgtccacccggccggcgacttgcggatcggcggtgtgttcatcgaccagacgggccga
ccggttggacttatcaggcgtaagggcagggggacgacgctttcaggcctcgatgtccgc
acggaacagacggatcctggcttcacggtggacagcgggctggaacgggaattgaccggt
ggattggatcgtcaggaattcgaagccatgttcgggttgaatcatgcccggcttcgcgag
ggcggcgcagtgttgctgaacggcgaaggcgatctgggctcggcgctgtttgaggcgagc
gccggcacaagcggtattgcagcgttgctggcggctctggatacggatgccaaaaagctc
tatagccagcacggtcgggcgcagaatgcggtgatcaacgaggcgcgccgtcagctcgac
gagcagcggaaggcctggcgtgaggcgcagaccaaaccggctgagtggcaggagctaaat
cgcgcgcatgacaccgccaagacggctctcgacgacctcaccaaggccttggaagcgttg
cgtcggcgcgagaacgaattgaccgaactccgcacggtcgaaccattgctgcgtgagcat
gaccgcctggcaagcgcgctccaatcctatgcaacggttcccgatctgtccgcgcagcaa
cgcgaagaacggctggccgcagagcaggcgttgcagcgcgcgcagatagatcttcgtgaa
tctgaagaggaactcgcgcgttgtgccgccgcgctggatggactcgtcatcgaaccgttg
ctgctcgaccatgccgacgcgattgagcgcctggtctcaggcgtggaagctgcggccaga
aatcgccatgacgttcatcagcagaatggcctcatcgcaaagatcgagggtgagttggat
ctggatgtggcgaggcttgcgcccggggtgaatcgtcggaccattctcgaggccgtgcct
tcctccgccgaccgggtggcgttggaggggcacctggccgaggtgagtcgattgggcgaa
cggcttgaaggctatcgtgagcgcgccgaagcgttggatgccgccttgcaaccggccagc
gtgttgcccgatacagtaccggatccactgcacagacaggcgttcacggcggccatacga
gcagggcaggcacagggtgatgtggtcaggcagaagagcgaagcggatcgccggcttcgc
gaactggagggccagcttgccctggcgctctccgagctcggtctcgaatcggagcaggcg
ttgcgtcgcagccaaccggttttagaggctcagattgcgcaggcgaaacaggatctgacg
gaaatcgaggcgcagcttaccaagtggcgtgacgaatccgaacgggtcgggcgcgacctc
gacggacaacagctgcggcaacggcagctcgctgcggaaggtgaggtggtgacggcggag
actctgcgtcaggcccgcgccaaacgttccgaggagtggacggcgattcgtcgtacctac
atcgatgagacaagcggaacggatcaactggcgctggggttcgacgccgccaaggccttg
ccggagacgtttgaatcggcagtgggcgaagccgaccgtcaggcggacttgcttcgtgcc
gacaccaaacgcgcggctggattggaagagtgctcggcgcgcatcgagcagatggaattg
cgccgcaaggaactggcgggcgagatggccgcgcgccgcgccgatagggacggcgtgcaa
gcggcctggagacagcgccttgtccaagccgggttgcctgacttggatcccgagacgttg
cgtgaatggcagggacgccggcatgaggcgctgcagctggttgagcgggtgacggccctg
cgtgtcgaccgcgaccgggtgctggccgatgcgggcagagcggcagccgccattgccggg
gagttgcgtgccgtcggccatgctctcgccacgactccggccgaagaggcggaacaactc
tccgcgctgatcgaccaagccgtgcgttgggaacaatcggcgaccgcagcggaggctgag
cagcaggcgcgtctcaagacggctcacaatcaacggatcgagcgggagaaggtcggccgg
caggtcagcgagaccgaggccgaacatcgccgtcacctggacgcgctgcaggcctggcac
accagactgttcctcgcgggtgacgcgccgccggaagccctcaagtcgcgtctcgacgaa
ctcgacggattggctcggcaggcgtcggccttagcggacgcgcaacaacgaaaggcgcaa
ttgcaggccgtggtcgatgacctcctgacacaggctgcgcaggtggcggagttactcggc
gaggcggttcctacgatgttggatgattgtgcggatcgcctgcgcaagcggttgggtgtt
tctaggcaacatcagcaggaagggcatgcgctcattcgcgaccgcacgaaggcccaagag
aagaagcgacaggccgcggccgtacaggtcacggaggccgccgtgctggcaggcctctgc
acacgagccgggggtgcgacgatcgagcagttgccggaattggaagaacaggcggcgaaa
aaacgtgagctgcggaaatcactcgcgcttctgcgccagcaactggctcatgcttcgcct
cagtcggaagcagagttacgggcgcgcctcacggggctggatgtgccggccctcgagagc
gagcgtgaacgttgccgtacggagagggtgcggctagagcaggaacagacctcggtgcaa
cggacggaagagcaggccagacgcgcgctggaggtcatcgacgcgtcggatcgcgcggcg
ctggcgcgtgaggcgatggaatctgcggcggcgcgataccgttcggccatcaggccctgg
gccaggctgaaacttgcgcgggcgctcctgcaggaggcgttgaaccggtttcgtgaacgg
gcccaggcacccatggtgtctgccgcatctgcctacttttcgctgatgacggggggcgcc
tacgaacggctagtgacggacgagcgtgaggacaggccggtgctgtgcgcgcaacgggcc
ggcggtgtgacgatcggcatcgaggcgatgagcgaaggcaccgccgatcaattgtacctg
gcgctacggctggcagcgctggagttacggcgtccctctcatccgccgatgccgctggtg
ctcgatgataccctcattacatccgatgacgcgcgtgcggccaatattctacgggcactg
gcgcgcttcgccgagggcagccaggtcatgttgttcacacaccatcggcatctgctcgat
gtcgctcgcagcacactgggagacaccgctgttatgactcacagactctga
DBGET
integrated database retrieval system
