Nitrospira defluvii: NIDE1920
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Entry
NIDE1920 CDS
T01281
Name
(GenBank) putative tRNA modifying enzyme, MiaB-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE1920
Enzymes [BR:
nde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NIDE1920
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
NIDE1920
Prokaryotic type
Methylthiotransferases
NIDE1920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
CBK41646
UniProt:
D8PEI7
LinkDB
All DBs
Position
complement(1816962..1818305)
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AA seq
447 aa
AA seq
DB search
MSTSMPRASLHTLGCRLSQSETSMLADTLARRGYQLVEFGKETDLLVLNTCSVTENAEKD
CRYAVRKTLRHSPHAFVAVTGCYAQTGATQLQKVPGIDLIVGTQFKMNLPDYLPAPAKLR
KQPEPELRHSRTIDREDFVLPGTAYSDSTRALLKIQDGCDFMCSFCLIPFARGRERSRTA
EDVLREARELAAHGYRELVLTGVNIGRYSYQGLGLVELLRELESVPDVTRIRISSIEPTT
VPAALLEHMAGSTKLCHYLHLPLQSGDNTILQAMNRRYAVREYEELVEQALALMPDLGLG
TDLMVGFPGEDEQAFANTVMTVERLPFSYFHVFSYSSRPGTAAARLEDQISPAVIRQRSK
ALSELSRTKALAFYQQQIGHTLPVLFEQGERDGFRTGTTANFTRVAVAADAVEAGSIHQV
TITGIMDGLAYGRPVATVSAPSHRPLL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccagcatgccacgcgcctcactccatacattgggctgccgtctcagccaatcc
gaaacctccatgttagccgataccctggcgcgccgggggtatcaactggtggagttcggc
aaggagacggacctgctcgtcttgaacacctgctcggtaacggagaatgccgaaaaagat
tgccgctatgccgtccgcaagactttgcgtcactcgccgcatgccttcgtcgcggtaacc
ggttgttatgcgcagaccggcgccacgcagctgcagaaggtacccggtatcgacctgatc
gtcggtacccagttcaagatgaatctccccgattatctcccggcgccggccaaactccgg
aaacagccggagccggaacttcgccatagccgtacgatcgatcgggaagacttcgtcctg
cccggcaccgcctattccgactcaacccgcgccctgctgaagattcaggacggctgcgat
ttcatgtgcagcttttgcctgattcccttcgcgcgcgggcgtgaacgcagccggaccgcc
gaggatgtgttgcgggaagctcgcgaactcgccgcccatggctatcgggaactcgtgctt
accggcgtcaacatcggccgatattcgtatcagggtctagggctggttgagctcctgcga
gaacttgagtcggttcccgatgtcacccggatcagaatttcctcgatcgaacccacgacc
gtcccagctgccttactggagcacatggccggctccacgaaactgtgccactacctgcac
ctccccctgcaaagcggcgacaataccatcttgcaggcaatgaaccggcggtatgccgtc
cgcgagtatgaggagctggtcgagcaggccttggcgctgatgccggacctcggattggga
accgacctcatggtcggatttcccggcgaagacgaacaggcattcgcgaatacggtcatg
accgtcgagcgactcccattctcctattttcatgtcttcagctattcgtcccgtccgggt
acggcagccgctcgcctggaagaccagatctcacccgccgtcatccggcagcgcagcaaa
gccctgtcggaactgtcacggacgaaagcgctggcgttttaccagcaacagatcggccac
accctgcccgtcttgttcgaacagggggagcgcgatggatttcggaccggcaccacagcc
aacttcacccgggtggcggtcgcggccgacgccgtcgaggccggctcgatccaccaggtc
accatcaccggcatcatggacgggctggcctatggccggccggtcgccacagtctcagcg
ccctcgcacaggccacttttatga
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