Nitrospira defluvii: NIDE1932
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Entry
NIDE1932 CDS
T01281
Symbol
fdsA
Name
(GenBank) Formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
nde
Nitrospira defluvii
Pathway
nde00630
Glyoxylate and dicarboxylate metabolism
nde00680
Methane metabolism
nde01100
Metabolic pathways
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NIDE1932 (fdsA)
09102 Energy metabolism
00680 Methane metabolism
NIDE1932 (fdsA)
Enzymes [BR:
nde01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NIDE1932 (fdsA)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_6
Fer4_8
Fer4_17
Fer4_9
Fer4_Nqo3
Fer4_10
Fer4_16
Fer4_15
Fer4_2
Fer4_4
Fer4_21
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
CBK41658
UniProt:
D8PEJ9
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Position
1827127..1829853
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AA seq
908 aa
AA seq
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MKLEINGRPVLASPGDTIYSAAKKAGIAIPGLCSSDDLAPFGSCRLCLCEVEGQSGLPAS
CTTPVREGMVVHTESERLNRLRRNIVELYLSEQPAGDRAPESLQWLAKSLGLRQVRYPQP
SHRQDVVDRSNPFFTFDNAACISCARCVRACDEIQGTHALTMLHRGFASRPVAGAASLTG
EEAAGFASSNCVSCGACVKECPTGALMEKTVAEQGPPERTVRTTCAYCGVGCAFDAGVGD
GTVVNMVPADDGPSNQGHACMKGRFGWTYNYAPDRLRVPLLRQGNQWVEMSWPDALDRIA
HEWVRLRDTYGPDALATISSSRGTNEENYLFGKFMRCVVGSNHIDNCARVCHSATVTGMM
DTIGASAATNSIQDLDLAKLVLVVGANPTESHPVVGARIKQAVRRGAALIVIDPRRTELA
RLADLHLQLHPGTNVALLNGLGHILIQEGLIDQDYVRDRTQGFEEWVKVVESCTPETTSK
VTGVPAHLIAEAARRYATSGGSMAVHGLGMTEHRWGSHGVMALVNLALATGNIGKPGTGI
NPLRGQNNVQGASDVGCLPTFFAGYQPFDNPELAAAHLAITGRPLPTTRGMKTPDMWDAA
IAGTLKSLWIIGYDVAQTDPNLKKVHAALKSLEFLIVQDLFLSETAKLAHLVIPGASFLE
KDGTFTNLERRIQRIRKAVEPPAGVLPDWQVVCEVSARMGYPMWYGHPSAIMDEIAQLAP
MFAGVSYDRLEAPEGLQWPVPSKEHPGTSLMHEHSFPKGKAQFVAVDYLPPGESPTETYP
LVLITGRILQHYNCGAQTRRTGIMQVVDTDVLEIHARDAAQLDLHDGEIVRLVSARGEAR
LPVMVSDRVQPGELFTSFHFPHTDLNVLLSSSADESSKCPEYKVSTVRIEKVLPAGTPAT
PMRVMLIT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctggaaattaacgggcgtccggtgctggcgtcgccgggcgacacgatttacagc
gcggcgaaaaaggccgggattgccattcccggactctgttcgtcggacgatttggctccg
ttcggctcctgccggctctgcctctgcgaggttgagggccagagtggcttgcctgcctcc
tgcacgactccggtgcgcgagggcatggtggtccacactgagagcgagcggctgaaccgg
ctccgtcggaacattgtcgaactctatttgtccgagcaaccggcgggggatcgggctccg
gaatccctgcaatggttggccaagtcgctggggcttcggcaggtgcggtatccgcagcct
tcccaccggcaggatgtcgtcgatcgctccaatcctttcttcactttcgacaatgccgcc
tgtatttcctgcgcccgctgcgtacgtgcctgtgatgaaattcaagggacccatgcgttg
acgatgctccatcgcggcttcgcgagccggccggtcgcgggggctgcgtcgttaaccggg
gaggaggcggccgggtttgcttcctcgaactgtgtctcctgcggcgcctgcgtgaaggaa
tgtcccaccggggccctgatggagaaaactgtcgctgagcaggggccgcccgaacggacc
gtgcgcaccacttgcgcctattgcggtgtcggctgtgccttcgacgccggagtgggcgac
ggcacagtcgtgaacatggtgccggccgacgacggcccgtccaatcaggggcatgcctgc
atgaaggggcgattcggctggacgtacaactatgcgccggaccggttgcgtgtgccgttg
ctccggcagggaaaccagtgggtggagatgtcctggccggacgcgttggaccggatcgca
cacgagtgggtacgtctgagagacacctatgggcccgatgcgctggcgacgatttcatcg
agtcgcggcacgaacgaagaaaactatctgttcgggaaattcatgcgctgcgtagtcggc
agcaatcacatcgacaactgcgcgcgggtctgccacagcgccaccgtgaccggcatgatg
gacacgatcggcgcgtcggcggcgaccaattccattcaggatctggatctggcgaagttg
gtcctggtggtcggggccaatcccacggaatcgcatccggtggtcggtgcgcgtatcaaa
caggccgtacgacggggtgccgcgttgatcgtgatcgatccccggcgcaccgaactcgcc
cgcctcgcggatctccacctgcaactgcatcccggcacgaatgtggccctcttgaacgga
ctcgggcacatcctgatacaggaagggttgatcgatcaggattatgtgcgcgaccgtacg
cagggctttgaagaatgggtgaaggtggtggagtcctgcacgccggagaccacgtcgaag
gtgaccggcgtcccggctcatctgattgccgaagcggcgcgtcggtatgccacaagcggc
ggctcgatggcagtgcatggcttgggcatgaccgaacatcgctggggtagccatggggtg
atggcgctggtgaatctggcgttggccaccggcaacattggcaagccgggcaccggcatc
aacccgttacgcgggcagaacaatgtgcagggcgcatcggatgtcggctgcttgccgact
ttctttgccggttatcaaccgttcgacaatcccgaactggcggccgcgcatctggcgatt
acggggcggcccttgccgacgacgcgcgggatgaagacgccggacatgtgggatgcggca
atagccggcacactgaagagcctctggatcatcgggtacgacgtggcccagacagatccc
aatctcaaaaaggtgcatgcggcgctgaagagtctggagttcctcatcgtgcaggatctg
tttcttagcgagacggcaaagctggcccacctggtgattccgggcgcctctttcctggag
aaggacgggacgttcaccaatctggagcggcgtattcagcggatcaggaaagcggtggaa
ccaccggccggcgtcctacccgattggcaggtggtctgtgaagtctcggcgcggatgggg
tatcccatgtggtacggacacccctccgccatcatggatgagattgcgcagctggcgccg
atgtttgccggcgtgtcgtatgatcgcttggaggcgccggaggggttgcagtggccggtc
ccgtcaaaggagcatcccggcacctcgttgatgcacgagcattcgtttccgaaaggcaaa
gcgcagtttgtggcggtcgattatctgcccccgggagagtcgccgacggagacctatccg
ctggtgctgatcaccgggcgtattctgcagcactataattgcggcgcccagaccagacgg
acgggcatcatgcaggtggtcgataccgatgtgttggaaatacatgctcgcgatgcggcg
cagttggatttgcacgatggcgagatcgtccggctcgtgagcgcgcgtggcgaggcccga
ttacccgtcatggtcagcgaccgggtgcagccgggggaactgttcacgagttttcacttc
ccccacacggatctgaacgtgttgctttcctccagtgccgatgagagttcgaaatgcccg
gaatataaagtttcgacggtgcgaatcgagaaagtcctgccggctggaactcctgctacc
cccatgcgagtgatgttgatcacatga
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