Nitrospira defluvii: NIDE2053
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Entry
NIDE2053 CDS
T01281
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nde
Nitrospira defluvii
Pathway
nde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NIDE2053 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nde01007
]
NIDE2053 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE2053 (lysS)
Enzymes [BR:
nde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NIDE2053 (lysS)
Amino acid related enzymes [BR:
nde01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NIDE2053 (lysS)
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NIDE2053 (lysS)
Prokaryotic type
Other AARSs
NIDE2053 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBK41773
UniProt:
D8PEW4
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All DBs
Position
complement(1971577..1973058)
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AA seq
493 aa
AA seq
DB search
MDELNDQRQQRIKKLDHLRQLGVAPYGTRFEVKDRAGQLTRLHGEKTKEVLEQEQISCTI
AGRIVGLRRFGKAAFAVLQDGSDRLQVYLKKDTLGEQAHQISEGLDLGDWIGVTGVLFRT
KTNEFTVEVKVLTFLSKALRPLPEKWHGLTDVETRYRQRYVDLIANPQVHQIFALRSRIV
SGIRAFLIERGFLEVETPMMHPIPGGAAAKPFVTHHNALGAELYLRIAPELYLKRLIVGG
FPRVFEINRNFRNEGISTIHNPEFTMLEFYVSYADYHDLIVLTEELFGRLAQDILGTTTI
DYQGTHINLGSPWRRWSYHQSILEVNSLPPSVLTNRDEALAAAQRLGVEVSPKESLVNIL
NEIFEETVEPRLQQPTFITDYPIEISPLARRKDSDPSLTDRFELYIAGREIANAFSELND
PLDQRERFEAQAAKHAAGDEEAHRVDEDFLRALEYGMPPTAGEGIGIDRLVMLFTNQSSI
RDVVLFPQLRPEK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactgaacgatcaacgccaacaacgcatcaagaaactcgaccacttgcggcaa
ctcggggtagctccctatggcacgcgcttcgaggtgaaggaccgggccggacaactcacg
cgcctgcacggtgaaaaaaccaaggaggtgctcgagcaggagcagatcagctgcaccatc
gccggccgcatcgtcggactacgccggttcgggaaagccgcctttgccgtactgcaagat
gggtcggaccgtctgcaggtgtatctgaagaaggacacattgggcgagcaggctcaccag
atttccgagggactggatctcggcgactggatcggagtcacaggtgtcttgttccgcacc
aagaccaacgaatttaccgtcgaagtgaaagtcctcacgtttctgagcaaagcgctccgc
ccgctcccggaaaagtggcatgggctcaccgatgtcgaaacccggtaccggcagcgctac
gtcgatctcattgccaatccccaggttcaccagatattcgccctgcgcagccgcatcgtg
tccgggatccgcgcctttctgatcgaacgcggcttcctcgaagtcgaaacgccgatgatg
cacccgattcccggcggcgccgccgcaaaacccttcgtcacccatcacaatgccctgggc
gccgagctctatctacgcattgccccggaactctatctcaagcggctgatcgtcggcggc
ttcccgcgcgtgttcgagatcaaccggaatttccggaacgaaggcatctcgacaattcac
aatcccgaattcaccatgctggagttttacgtctcctacgccgactaccacgacttgatc
gtgctgaccgaggaactcttcggccgattggcccaggacattctcggcaccaccacgatc
gactatcaaggcacacacatcaatctcgggtcgccgtggcgccgatggtcgtatcaccaa
tcgattctggaagtgaatagcctgccgccgtccgtcctcacgaatcgcgatgaagccctt
gcggcagcccagcgcctcggtgtcgaagtctctcccaaagaatcgctggtgaatatcctc
aacgagatcttcgaagagaccgtcgagccgcgcctccaacagccgaccttcatcaccgac
tacccgatcgagatttccccgctcgcgcgaaggaaagactccgatccgtcgctcaccgac
cggttcgagctctacatcgcgggacgtgaaatcgccaacgccttctccgagttgaacgat
ccgctcgatcagcgcgagcgcttcgaggctcaggcagcgaaacatgccgccggagacgag
gaagcccaccgcgtcgatgaagacttcctgcgcgccctcgaatacggcatgccgccgact
gcgggcgaaggcatcggcatcgatcggctggtcatgctcttcaccaatcagtcctcgatc
cgggatgtggtcctcttcccgcagctgaggcctgaaaagtag
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