Nitrospira defluvii: NIDE2073
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Entry
NIDE2073 CDS
T01281
Symbol
top6B
Name
(GenBank) DNA topoisomerase VI, subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nde03032
]
NIDE2073 (top6B)
Enzymes [BR:
nde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NIDE2073 (top6B)
DNA replication proteins [BR:
nde03032
]
Prokaryotic type
DNA Topoisomerases
NIDE2073 (top6B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CBK41793
UniProt:
D8PEY4
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All DBs
Position
1985995..1987983
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AA seq
662 aa
AA seq
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MTAVEMGARQREISVSEFFTKNRHLLGFDNPRKALLTCVKEAVDNSLDACEEAGILPEVT
VRLETVANGQAPVAPSQATRFRITVTDNGPGIVRQQIPRVFAKLLYGSKFHRMRMSRGQQ
GIGISAAGMYGQLTTGKPVKVISRTGPRAAAHYFEVQIDTKKNEPLVHENKQIDWAQPQG
TEVALEVEGRYQKGRASVDEWLEQTSIANPHVRLVYHTPEGETKEYPRTYHELPPSPKEI
KPHPYGIEFGALLKMLQDTKSHTVAGFLASDFCRVSPALAEEICKAAKVSPATKPRDVKH
QAAETLYKTIQTTKIMAPPTNCISPIGEKAILSGLYKQIKGEFYTAVSRPPAVYRGYPFI
IEAGLAFGKGPEEAAKPQQASVPLAEGEDQGNDTEQARVIRYANRVPLLYQQSACATFKA
VLSTTWRNYGVSQSRGALPAGPMVIFVHMASVWVPFTSESKEAIADYDEIQKEITLALRE
AGRRLGIFLRRRERAASEFRRRNIFDLYIEEVVAACNRLKGGNLPTEKLKEQLHKIASSR
TGGLKTDEALGKTGAGPEGLPHSIIVTAEGIEGETEIAQQTPGSPVVSVNTAEAEPIVRP
ESTVKTKRGSKEKSNVGKGRSVGATKAKAGQQALFGDEPSSKKQAAPLKKKPARTTATRK
RT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcggtcgaaatgggggcgcggcagcgggaaatttccgtttccgaatttttcacg
aagaaccggcatctcctgggtttcgacaatccccgcaaagcgttgctgacctgcgtgaaa
gaagccgtcgataactcgctggatgcgtgcgaagaagcaggcattctgcccgaggtgacg
gtgaggcttgaaacggtcgcgaacgggcaggcgccggtcgcgcccagtcaggcgactcgt
ttccggatcacggtgaccgataacgggccgggtatcgtgcgtcagcagatcccccgtgtg
ttcgccaaattgctgtatggttcgaaattccaccgcatgcggatgagccggggacaacag
ggcatcggcatttcagcggccggcatgtatgggcaattgacgaccgggaagccggtcaag
gtgatttcccgcacggggcctcgcgcggcggcgcactacttcgaagtgcaaatcgacacc
aagaagaacgagccgttggtacatgagaataagcagatcgactgggctcagccgcaaggc
actgaagtggcgcttgaggtcgaagggcgctaccagaagggccgcgcgtccgtcgatgag
tggctggagcagacgtcgatcgcgaacccgcacgtgcggctggtctatcacacgccggaa
ggggagacgaaagagtatccccggacctaccacgaactgccgccttcaccgaaagaaatc
aagccgcatccctatggcatcgagttcggggccttgctcaagatgctgcaggatacgaag
agccatacggtagccggtttcctggcgagcgacttctgccgggtttcgcccgcattagcc
gaggagatctgcaaggcggcgaaagtgtcgcccgccaccaagcctcgcgatgtgaagcat
caagcggccgaaacgctctacaagacgattcagaccaccaagatcatggcgccgccgacg
aactgcatctcgccgatcggggagaaggcgatcctctcgggtctctataaacaaatcaaa
ggtgagttttatacggccgtgagtcgaccaccggccgtctatcgcggctacccctttatc
attgaggcagggctcgccttcgggaaaggtccggaagaagccgccaagccgcagcaggcc
tccgtgccgctggccgaaggtgaagaccagggaaacgataccgagcaggcgcgggtgatc
cggtatgcgaaccgggtgccgctgctctatcaacaatcggcttgcgccacgttcaaggct
gtgctcagcaccacctggcgaaactatggggtctcgcagtcgcgtggcgcgctgcctgcc
ggccccatggtgatttttgtgcacatggcatccgtgtgggtgccgttcaccagcgagtcg
aaagaagcgattgccgactacgacgaaattcagaaggaaattactctcgcgttacgtgag
gccggacggcggttggggatttttctgcgaagaagagagcgggctgccagtgagttccgc
cgtcgcaatatcttcgatctctatatcgaggaggtggtggccgcttgcaatcgcctgaaa
ggcggaaaccttcccacggagaaattgaaagagcagttgcacaagatcgccagttcacgg
acgggaggcctgaagaccgatgaggctctgggaaaaaccggcgcgggaccggaagggctg
ccgcattccatcatcgtgaccgccgaggggatcgagggagagaccgagattgctcagcaa
acgcctggatcgcctgtggtttccgtcaatacggcggaggctgagccgatcgtcaggccg
gaatccacggtgaaaacgaagcgcggctcgaaagagaaatcgaacgtcgggaagggcagg
tctgtcggggcaacgaaggcgaaagccggacagcaagctctgtttggcgatgagccgtcg
tcaaagaagcaggcggcaccgctcaagaaaaagcccgcgcggacaaccgccacccggaaa
aggacatag
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